CI01000030_08064681_08066997


Basic Information

Item Value
gene id CI01000030_08064681_08066997
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 8064234 ~ 8067042 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_08064681_08066997.mRNA
ACAGACACCTGAAGTCCTTATGCATACCAGCTGTGAAGGTGCACCATGAATTTTGAAGAGCAGGGCATGGGGAGGGTAGTCCATTCCTGGGCCAGATTTGCCCCAGCTGGACATACTGCCCTCGAAGAGGCCCTGAGGGTCTTTAACCCCATGTCCAAGGATCTGTCGAACACTGAGAGACAAATGATGTCCTTTCTTCAAGAGCTAAGGAAAGAAGGAGCTAAGCCTGTGATTTTGAGGAGCAAAGATGTGTACGGATACACGTCTTGCACCACAGAGCCAATCTCTTCCAAGATTGGCAGCAAGGTTCAGAAAGTGCAGAAACCTTGCAAGAAGCGAGGACGGAAAGGTTTGAACAAGAGCAAGGATGTGAATTACTCGATGCTCAGTAGAGCAGCAAAGGACATTCTCCAAAACCAACCCAAGATCCTGCTTACCAATCTCTCGGTGGACCGTCTTAAGCAGAATGCTGCATCGGCAATGCTAGATAAACATTCTGTTCAAGCGCAGCAGTGCCTCAAGCTAACAAACATAAAGGGGTTGACTGGAGGCCACACAGCGAGGTTGCAAATTCACTTTGGTGCTGATTCGAAAAGCTCACCCAGTTTTGCTCTGGGACGGCCACCGGATCGCTCTGGAATTCCGCACTCTCCCACGGAAAATGGCAGTCAGACATCAAACGTAGTTGCCTTGGACAACAAACGTGTTTTGTCGTGTCCGTTCAAAGTAGACGATGCCCTTATTGGAGACTCTGCCCCAGTAGTCTGTCAAAATGGGTTCGGTCTTAAAGATGGTAGCATTTATAAGAAAATCGAAACGGTATCAGGTAAACCTGATGTGATGACCAGTGGTCTAGACAATGGTTCAGTGAGGAGACTTCATTTCCAAAGCTTCAACTGGTCCCAGTCGACACTCACCAATGGACAAGATGTTTCTAGACTGAATGGCAATGGTCTCGAGTGGAAGGTTATAAAAGTCGACGATTCGGTCACAGACGAGGAGGTTTCATTGGTTGAAGATGTTCATGATTTATCAACAGGATGGAAATTTGCTTTTTGTGCACAAGAGGAGGAAAAGATGCGTGAGATTTGAGTTAGCATTGAGCAATGCCTAAGGCCTTTGGTTTTTTTTTTTTCCAAGCTAAAGTAGATGATGGCAAAGCAGCAGTTTATTGGTGCCACGAGGCAAGCGTTTAAAATTTGTTAGAAATTTAAGTTAACCAATGTATGGGTCCTGTTAAAAATCTTACATCCACATGCAAAATACAAACAGAATATATTTTCCTGTTATTCAGTTTTTATTTCCATCCAGTTGAATCTGTGACACTCAAAAGCTGTAAATGTCAGTGTTGTATCTTTAGTTACTGTTATCGAGTTGTGAATTAAAATATGTTTGAGAAATGTTTGGTGTGGATTACTGGGGTCTCAGTGTGTCCTTTTTGTAAAAAAGAACAGACAACATAAAAGTAGTAATTTTTTGCAGCACAATGACATCAGGCCTGGACATGATTACATATTGTTATGGGCAACAAAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_08064681_08066997.mRNA True 1539 mRNA 0.43 2 8064234 8067042

Neighbor

gene id symbol gene type direction distance location
CI01000030_07987094_07988489 NA coding downstream 75553 7986780 ~ 7988681 (-)
CI01000030_07957599_07964510 NA coding downstream 99724 7957323 ~ 7964510 (-)
CI01000030_07915089_07922551 NA coding downstream 141530 7915019 ~ 7922704 (-)
CI01000030_07901178_07901441 NA coding downstream 162793 7900590 ~ 7901441 (-)
CI01000030_07889005_07897250 ATRIP coding downstream 166984 7888331 ~ 7897250 (-)
CI01000030_08096309_08096995 KCTD6B, KCTD6, KCTD6A coding upstream 27801 8094843 ~ 8096995 (-)
CI01000030_08101126_08107526 PDHB.S, PDHB, PDHB.L coding upstream 33826 8100868 ~ 8107682 (-)
CI01000030_08123594_08127280 PXK coding upstream 56150 8123192 ~ 8127487 (-)
CI01000030_08128628_08130625 RPP14 coding upstream 61420 8128462 ~ 8130625 (-)
CI01000030_08144020_08149228 TBC1D20 coding upstream 76846 8143888 ~ 8149228 (-)
G163479 NA non-coding downstream 50944 8013054 ~ 8013290 (-)
G163478 NA non-coding downstream 52240 8011148 ~ 8011994 (-)
G163385 NA non-coding downstream 181141 7881819 ~ 7883093 (-)
G163463 NA non-coding downstream 202546 7859913 ~ 7861688 (-)
G163459 NA non-coding downstream 206294 7855627 ~ 7857940 (-)
G163493 NA non-coding upstream 89329 8156371 ~ 8156606 (-)
G163398 NA non-coding upstream 98055 8165097 ~ 8167093 (-)
G163495 NA non-coding upstream 101476 8168518 ~ 8168826 (-)
G163496 NA non-coding upstream 102314 8169356 ~ 8169580 (-)
G163500 NA non-coding upstream 142699 8209741 ~ 8209978 (-)
CI01000030_07788973_07791700 TUSC2B, TUSC2 other downstream 271852 7788797 ~ 7792198 (-)
CI01000030_07736031_07737720 LSM7.L, GM13182, LSM7 other downstream 326230 7735436 ~ 7737720 (-)
G163139 NA other downstream 914090 7149474 ~ 7150144 (-)
G163065 NA other downstream 1138577 6924483 ~ 6925657 (-)
CI01000030_06747047_06752255 NA other downstream 1311823 6746960 ~ 6752411 (-)
CI01000030_08185866_08194632 NA other upstream 124877 8184897 ~ 8197266 (-)
G163873 NA other upstream 866371 8933413 ~ 8933982 (-)
CI01000030_09277337_09294501 NA other upstream 1220164 9276431 ~ 9294802 (-)
G164071 NA other upstream 1408146 9475188 ~ 9476264 (-)
CI01000030_10103451_10131419 NA other upstream 2048473 10102944 ~ 10133765 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_020227 si:dkeyp-87e7.4 coding NC_007133.7 CM002906.2 10232527 ~ 10262441 (+)