Gene
RNA
| Item | Value |
|---|---|
| gene id | G172475 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000034 |
| NCBI id | null |
| chromosome length | 5914002 |
| location | 4334149 ~ 4334773 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU195947 | True | 625 | lncRNA | 0.39 | 1 | 4334149 | 4334773 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000034_04318823_04319740 | FOXD3, FOXD1 | coding | downstream | 14022 | 4318544 ~ 4320127 (-) |
| CI01000034_04239062_04242494 | NA | coding | downstream | 91509 | 4238771 ~ 4242640 (-) |
| CI01000034_04216451_04218876 | NA | coding | downstream | 112268 | 4216212 ~ 4221881 (-) |
| CI01000034_04174469_04189564 | SEZ6L2 | coding | downstream | 144585 | 4174416 ~ 4189564 (-) |
| CI01000034_04165535_04172272 | KCTD13 | coding | downstream | 161877 | 4165373 ~ 4172272 (-) |
| CI01000034_04350907_04363668 | NA | coding | upstream | 15833 | 4350606 ~ 4363683 (-) |
| CI01000034_04370706_04374491 | SPC24 | coding | upstream | 35853 | 4370626 ~ 4375413 (-) |
| CI01000034_04376314_04386958 | NA | coding | upstream | 41541 | 4376314 ~ 4386958 (-) |
| CI01000034_04392399_04400096 | LDLR, LDLRA | coding | upstream | 57427 | 4392200 ~ 4400096 (-) |
| CI01000034_04431146_04446849 | SMARCA4A, SMARCA4 | coding | upstream | 96373 | 4431146 ~ 4447168 (-) |
| G172422 | NA | non-coding | downstream | 42403 | 4291531 ~ 4291746 (-) |
| G172421 | NA | non-coding | downstream | 43295 | 4290653 ~ 4290854 (-) |
| G172420 | NA | non-coding | downstream | 44054 | 4289847 ~ 4290095 (-) |
| G172419 | NA | non-coding | downstream | 55994 | 4277853 ~ 4278155 (-) |
| G172415 | NA | non-coding | downstream | 62654 | 4265083 ~ 4271495 (-) |
| G172480 | NA | non-coding | upstream | 21540 | 4356313 ~ 4356554 (-) |
| G172456 | NA | non-coding | upstream | 70862 | 4405635 ~ 4409237 (-) |
| G172488 | NA | non-coding | upstream | 134161 | 4468934 ~ 4469211 (-) |
| G172504 | NA | non-coding | upstream | 164231 | 4499004 ~ 4499747 (-) |
| G172507 | NA | non-coding | upstream | 181098 | 4515871 ~ 4516396 (-) |
| G172151 | NA | other | downstream | 936336 | 3391144 ~ 3451802 (-) |
| G172016 | NA | other | downstream | 1097534 | 3234963 ~ 3236615 (-) |
| CI01000034_02510595_02511512 | NA | other | downstream | 1822628 | 2510061 ~ 2511521 (-) |
| G172593 | NA | other | upstream | 658187 | 4992960 ~ 4994943 (-) |
| G172800 | NA | other | upstream | 1454259 | 5789032 ~ 5789738 (-) |
| CI01000034_05795972_05811363 | NA | other | upstream | 1462797 | 5795835 ~ 5811781 (-) |
