CI01000039_07908291_07909766


Basic Information

Item Value
gene id CI01000039_07908291_07909766
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 7907904 ~ 7910468 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000039_07908291_07909766.mRNA
ACTAGTAAACAGTAATGTTTCTTATGTACATATGTGACCCTGGACCATAAAACCAGTCATAAGGGTCAATTTTTTTTAAATTAAGATTTATATAACATCTGAACGCTGAATAAATAAGCTTTCCATTGAATGTATGGTTTATTAGGATAGGACAATATTGGCCGAGATACAACTATTTGAATATCTGGAATCTGAGGGTGCAAAAAAATCCAAATATTGAGAAAATCGGCTTTAAAGTTGTCCAAATGAAGTCCTTAGCAATGCATATCCACTCACAAAAACAATTTTTTGATATATTTACAAAAAAATTTACAAAATATCTTCATGGAACATGATCTTTATCTAATATCTTATTGATTTTTGGCATAAAAGAAAAATCGATAATTTTGACCCATAGAATGTATTGTTGGCTATTGCTACAAATATACCCGTGCAACTTATAACTGGTTTTGAGGTCCAGGGTCACATATGTAAGAAAAGGTTTAAGTGAGAACCAATTAAAATTCTAGTGTTATCAAACTCAGGTGTGAGAAATTACTGAGAGTGCTTTAAAAAATTAAACCTTTCTATCTTTCTTACCTGAAAACAGAGTCACAGAGCGGCGGTGTTCAGAACCAGTAATGCAGGAGACACTTTCTGGTTTTCCCCCTGAAGAATGTATTTGGCCATTCAAGGATCTGATGTTGTGTCTCCCCTGGGAACATGAACCACACTTGCACCTCACAGGCAACAAACCTTACCACAGACCCACTTGGGGGTCATCAGGTATGGGAGGTGGTTCTGATTGTGCTTGTGACTGGACCTCTTTCCCTTATTACCATCCTGGGCAACTTACTGGTGGTCATCTCCATCCGAGTCAACAGTCAGCTACGGACCATCAGTAACTACTTTCTCATGAGTCTGGCGGTGGCAGACTTGATCTTGGGTACGGTGTCAATGAACCTATATACTGCATACATAATCATAGGCCGTTGGACATTGGGACATTTAGCTTGTGATCTGTGGTTGACGCTTGACTATGTAGTGAGCAACGCCTCAGTAATGAACCTGCTGGTCATAAGCTTTGACCGATATTTCTCAGTCACACGACCGCTGACTTATCGAACAAAGCGAACTCCGAAGACGGCAGTGGTATTGATCGCTGTGGCATGGGTGGTCTCGTTTGTGCTATGGGGGCCTGCTATCTTGTTTTGGCCTCATATGGAGGGACGACCATCTAGAGATGAAGCTCAAGTCTGTTCCATCCCCTTCTTGAAAGTACCTCTGATAACATATGGTACGGCCATCGCAGCATTCTACCTACCCGTCAGCATCATGATCATTCTGTACTGGCAAATTTATTGGGAAATTGAGAACAGAGCGAAAGGACTTGCTGGTTTTGTTGGGTCTGTGAAAAACACTACAGGTGTTCTGGATGGGTTGGACAAACAATCAATGCACAAAACCAGTACCAAGAGCAACTTGAGTCGCTCAAAGGAAGGAAATTCCAGAAAGGGACAAGGCTTTGCCAAAGGCATGTCAGTTGGGTGTTTTAATACAACAAGGAAGAAAACAGCAGCAATTTTGCAGAAGTCAGTTCATGAGAGTTGCAACAGCAGCTGGAACATTGAGGATGATAGCACATTGTCTTCTTCCACAGACGAGGAACATGAGCAGAACATCAATGCAAAAGCACCTTCACCTAATCAAGTTGCGATTAAGCTGAAGGACCTGCAAAGTAGACCACAGGATAGCAAGGATGTGCAAGAACAGTTCAACTCATCAGCTGAGCATCCCACTAGACAGTGCCACTTAAAAACACCCAGAAAGTCAGAAAACAGCATTGGCCACCAGTTCAGAGCAAAACATCGCATCAGTGCGATCATTAAAGAAAAAAAAGCGGCCCGGACGCTAAGCGCCATCTTGTTGGCTTTCATCCTCACGTGGACACCATACAACATCATGGTGTTGGCTTCCATTTCATACTGTGTTCCTGAAAAGCTCTGGCAGCTGGGATACTGGCTTTGCTATGTAAACAGCACTGTAAACCCCATGTGCTATGCCCTATGTAATGAGTCCTTCCGGGTCACCTTCAAAGCTCTGCTACTTTGTCGGCGTGGAGATAAACGGAAGTTGGACACAAACAGCTGGAATCGCCATGCCTCTGTGAGGCAGAAGAAGCCTTGTAGTACAGTGTAATTTTTCACCTTATCATTTGTTATTCTACAGTGTGGGTGCTTTTAATTGATCAATGATCCAGATACAGTGCTTCAATTGGCAGACAATAATTTTCTAGGGAATAACATAGGGTTTGTATTGACTCTAAATAAGCCTGAATCAACTTTTACTTTTATATTTGTATAATTAAATTTGTGTGTGCCTCTGCTTTTACATAATACACTGTCATTATGTTAAACTGCTTGATTTTGAATCTTGTCAGACACCAATGAGAAGTTACTTAGCCTTGTGGTCATAACTCTTTGGCAACATCAAAAGCTGTAATTGTACTTTTTTCACATCCAACAAAAGAAAAAAAAAAATCAATTGAGTATAATTTGGAATTGCATTATGTATAGATGGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000039_07908291_07909766.mRNA True 2565 mRNA 0.41 1 7907904 7910468

Neighbor

gene id symbol gene type direction distance location
CI01000039_07781930_07783389 NA coding downstream 124210 7781890 ~ 7783694 (-)
CI01000039_07658015_07658757 NA coding downstream 248852 7657540 ~ 7659052 (-)
CI01000039_07619613_07632295 WDR44 coding downstream 275609 7618880 ~ 7632295 (-)
CI01000039_07592640_07593317 NA coding downstream 312851 7592548 ~ 7595053 (-)
CI01000039_07523213_07573865 LRCH2 coding downstream 331753 7523197 ~ 7576151 (-)
CI01000039_07952703_07961286 NA coding upstream 41818 7952286 ~ 7962019 (-)
CI01000039_07987279_07996351 ARHGAP35 coding upstream 76744 7987212 ~ 7996921 (-)
CI01000039_08003424_08011297 NA coding upstream 92942 8003410 ~ 8012533 (-)
CI01000039_08022279_08026193 SCN4BB coding upstream 111431 8021899 ~ 8026193 (-)
CI01000039_08038068_08041738 NA coding upstream 126451 8036919 ~ 8041738 (-)
G183316 NA non-coding downstream 9071 7895793 ~ 7898833 (-)
G183314 NA non-coding downstream 12694 7894989 ~ 7895210 (-)
G183311 NA non-coding downstream 14489 7892964 ~ 7893415 (-)
G183282 NA non-coding downstream 46421 7858285 ~ 7861483 (-)
G183233 NA non-coding downstream 127631 7780063 ~ 7780273 (-)
G183277 NA non-coding upstream 9245 7919713 ~ 7920638 (-)
G183319 NA non-coding upstream 12269 7922737 ~ 7922947 (-)
G183255 NA non-coding upstream 51588 7962056 ~ 7965383 (-)
G183328 NA non-coding upstream 65095 7975563 ~ 7977048 (-)
CI01000039_07134422_07137732 NA other downstream 770137 7134422 ~ 7137767 (-)
CI01000039_06647926_06651530 NA other downstream 1259328 6646544 ~ 6653449 (-)
G182827 NA other downstream 1272704 6634547 ~ 6635200 (-)
G182771 NA other downstream 1399471 6507955 ~ 6508433 (-)
G182470 NA other downstream 2271140 5636058 ~ 5636764 (-)
G183261 NA other upstream 61648 7972116 ~ 7975045 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_030286 NA non-coding NC_007116.7 CM002889.2 37762706 ~ 37767059 (+)