G183277



Basic Information


Item Value
gene id G183277
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 7919713 ~ 7920638 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU208131
CTTTTTTCTTCATGAGTTAAATATTCCTGAATAAGAGGCATTTGAGCACACAAAGTGACATGGTTGTCCTTTTTTATGAGGACATAAATCTTTAGGTGTAATTCACCTAAAAAAAGAGAAAAGGTTTAGGGTTGCTTTAAATTAGGCTACTTCTCGGTTTGGTGAAACACAATCTAACCTAATTCAATCGAGGTGTAATTACTCTTTAGTCCTAATTACTCTTGCCACAAGACGCTTAGAAATAAGCTAACTGGCAGCATTGAGCGCGAGACACGGTGAGGAACGTTAAACTGACATCCGCCGAACTACAAGGTTTTGTAGAATTCACCAAATTCAGGGAGCAATCATCGATTAGATGGAAAGATTAGGCTACTAAATACATTTAGGAGCCATTTGTCTTACCTGTAAGTTTTCTGGTCTGGTTTTAATAGCACAGCAGCCTCAAGTCCACCAAAGGTCAAGCTCGCGCTATGCAGAGAGGACGCGCGCTACGGTCCGCTTCGCTTCAGTGATGCTTCACGGGCATCACATGTCATTCCTGTAGACAGGTGTAGAGAGCACAGCCCACCTGTGGCGCGAGCACACAACTGACTAAATAGAAGAAAGAGGAAAGAAGACAAACATAAACAAATTAACTTGTTAATGAGCAATTTAAATATTCTACGATCACTACTAATGACAGTGGGCGGGAGCCGTTGTGGAATTCCTGTCCCGCGGATGAGCGGTTAAAACAATGGGAAACGCACACACCCCACAAAATTGTTTTCTCAGATGGTTTTCCATTTTCGGTCCAGCCCCTCTGGCGCCCCAGAACATCCTAGGACTCAAACGTTCAGTGCAGAGCGCAATGGTTTATTAACATTTGTAGACAAAAAAGAAAGAAAGGAAAAAAAAAAAAAACAGTACTGCATTGCTTACTACCGGAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU208131 True 926 lncRNA 0.42 1 7919713 7920638

Neighbor


gene id symbol gene type direction distance location
CI01000039_07908291_07909766 NA coding downstream 9245 7907904 ~ 7910468 (-)
CI01000039_07781930_07783389 NA coding downstream 136019 7781890 ~ 7783694 (-)
CI01000039_07658015_07658757 NA coding downstream 260661 7657540 ~ 7659052 (-)
CI01000039_07619613_07632295 WDR44 coding downstream 287418 7618880 ~ 7632295 (-)
CI01000039_07592640_07593317 NA coding downstream 324660 7592548 ~ 7595053 (-)
CI01000039_07952703_07961286 NA coding upstream 31648 7952286 ~ 7962019 (-)
CI01000039_07987279_07996351 ARHGAP35 coding upstream 66574 7987212 ~ 7996921 (-)
CI01000039_08003424_08011297 NA coding upstream 82772 8003410 ~ 8012533 (-)
CI01000039_08022279_08026193 SCN4BB coding upstream 101261 8021899 ~ 8026193 (-)
CI01000039_08038068_08041738 NA coding upstream 116281 8036919 ~ 8041738 (-)
G183316 NA non-coding downstream 20880 7895793 ~ 7898833 (-)
G183314 NA non-coding downstream 24503 7894989 ~ 7895210 (-)
G183311 NA non-coding downstream 26298 7892964 ~ 7893415 (-)
G183282 NA non-coding downstream 58230 7858285 ~ 7861483 (-)
G183233 NA non-coding downstream 139440 7780063 ~ 7780273 (-)
G183319 NA non-coding upstream 2099 7922737 ~ 7922947 (-)
G183255 NA non-coding upstream 41418 7962056 ~ 7965383 (-)
G183328 NA non-coding upstream 54925 7975563 ~ 7977048 (-)
G183329 NA non-coding upstream 88186 8008824 ~ 8009050 (-)
CI01000039_07134422_07137732 NA other downstream 781946 7134422 ~ 7137767 (-)
CI01000039_06647926_06651530 NA other downstream 1271137 6646544 ~ 6653449 (-)
G182827 NA other downstream 1284513 6634547 ~ 6635200 (-)
G182771 NA other downstream 1411280 6507955 ~ 6508433 (-)
G182470 NA other downstream 2282949 5636058 ~ 5636764 (-)
G183261 NA other upstream 51478 7972116 ~ 7975045 (-)

Expression



Co-expression Network