CI01000039_07781930_07783389


Basic Information

Item Value
gene id CI01000039_07781930_07783389
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 7781890 ~ 7783694 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000039_07781930_07783389.mRNA
AAAATCAACTTCTTTTATTGGCGTGTTTAGCCGGATATGTGAGCTAAAAATTTAAATGAAAAAGTTAAAGCGTAATTTATAGAAAGTCCTAAATAGCAAAACATTTTTTCTATCACTCATCAATGTCAAAATATAGTTTGGTAACTCACTAGTAGATAAAACAGAACAGAAGAGAAAAAAATCATCATTCCTGAGAACTAAATTCCACAATGAACAAACACAGTTTATGTTTTGGATGCTGCAAAGAGTAATTATGCAAGTTATTTTCATGTTCCACACAGGCAACACAAAGAGAGAAAGACAAGATGGCTCCCAGATATGTCTGTGCGCTGATCATCTTCACAGGTTTTCTGTTCTTGTCTAGGTTTGAACGAACTGAGATAAAAAAAAAGTCTTCCATAAATCCATTCAAAATCAGCTCAGATGCAGCTCAAACAGAGACGACGACATTAGCGGGTGCATTAGCTGTGACTGAAGGTGTGTCCAACACGCCGAAGGCACAAGTAATCACAGACTTTCTTGGAACTGCCCCAATGAGCAAGTTGTCTGGAACATCAAGAGCATCATCTGCCGTTGCTTTAGCTGAACTCTCTCGGCAAACAACAGCTGAGACAGCAGCAGTGAGTGCAGCTGGGTCAGTGGAAACTACAGCTGGGACAGTCACCTTGTCTGAGACTATAGAGAAAGTTACGACATCCGTTTTACCAGTAACAAAAAAGGCAGAATCTCTAGAAACAGCAAAATCAACTCTAGGTGAAACAGTCACCGCGTGTACAGAAATAAAAGAAATTACCAATGTGGAATCATCGACAAATACAGCTCAAAAAACACCCAAACCTGAGAGTATAAGTGTTAGTGATTTTAAACAAACACATAAAAGTGAAACAGATGTGGAAATATTTGGGAAACCAACAGAAGTAGGCATCACAGTACCAAAACAAGAATCAGGGACAACCAGTTTTTCTCATACTACAACTACAGCTAATATCAAGAGTGCATCTCCAATACCAGAACCAAGGACAGATGGAGCAACAAATTTCATTACCAGTCAATTGAAAACTTCAAAAATTACATCTGAAAATAAAGCAACAACAGAAACTAGACCAGCTGCTACATTCAAAACAGCAGCATTTATAACTGAAACAAAAGTAGATTTAACTGAAGGAAAACCGGCACCAAGCACATTCGTAAAAATGCTAAAAACAGCAGGAACAGAGCCACCTAAAGTTGAAACAAGTGAAACAACCACAGTCAGACCACAAGAATCTACTCAAGCTATAAAAACTTCAAATGGTCCAACAAAAATAAATGGGGCTACTGGTATAAATCTTATAACTAGGATTCAAACTGCCATTGAAACCAAAGGAAAAACAGTGGGAAAACGATTAAGTACAGCAGGTAGAGGCATTACAATAAAAGGCAGACGTGGCCAGGAGAAGACACCCCTGTCCCATGATAAAACCTTGTATTCTGCCATCACTATGGGTTGTATCCTAGTTATATGTGCCCTGCTAGCACTTATTGTGTTTATAAAGGATTTTATCGGGTGCTAAGATACTCAGCCTATACAAATGTTGGTTAATCGTGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000039_07781930_07783389.mRNA True 1593 mRNA 0.38 2 7781890 7783694

Neighbor

gene id symbol gene type direction distance location
CI01000039_07658015_07658757 NA coding downstream 122838 7657540 ~ 7659052 (-)
CI01000039_07619613_07632295 WDR44 coding downstream 149595 7618880 ~ 7632295 (-)
CI01000039_07592640_07593317 NA coding downstream 186837 7592548 ~ 7595053 (-)
CI01000039_07523213_07573865 LRCH2 coding downstream 205739 7523197 ~ 7576151 (-)
CI01000039_07498583_07505779 NA coding downstream 275288 7498503 ~ 7506602 (-)
CI01000039_07908291_07909766 NA coding upstream 124210 7907904 ~ 7910468 (-)
CI01000039_07952703_07961286 NA coding upstream 168592 7952286 ~ 7962019 (-)
CI01000039_07987279_07996351 ARHGAP35 coding upstream 203518 7987212 ~ 7996921 (-)
CI01000039_08003424_08011297 NA coding upstream 219716 8003410 ~ 8012533 (-)
CI01000039_08022279_08026193 SCN4BB coding upstream 238205 8021899 ~ 8026193 (-)
G183233 NA non-coding downstream 1617 7780063 ~ 7780273 (-)
G183232 NA non-coding downstream 3248 7778331 ~ 7778642 (-)
G183231 NA non-coding downstream 4498 7776728 ~ 7777392 (-)
G183214 NA non-coding downstream 6708 7770429 ~ 7775182 (-)
G183212 NA non-coding downstream 46980 7734543 ~ 7734910 (-)
G183282 NA non-coding upstream 74591 7858285 ~ 7861483 (-)
G183311 NA non-coding upstream 109270 7892964 ~ 7893415 (-)
G183314 NA non-coding upstream 111295 7894989 ~ 7895210 (-)
G183316 NA non-coding upstream 112099 7895793 ~ 7898833 (-)
G183277 NA non-coding upstream 136019 7919713 ~ 7920638 (-)
CI01000039_07134422_07137732 NA other downstream 644123 7134422 ~ 7137767 (-)
CI01000039_06647926_06651530 NA other downstream 1133314 6646544 ~ 6653449 (-)
G182827 NA other downstream 1146690 6634547 ~ 6635200 (-)
G182771 NA other downstream 1273457 6507955 ~ 6508433 (-)
G182470 NA other downstream 2145126 5636058 ~ 5636764 (-)
G183261 NA other upstream 188422 7972116 ~ 7975045 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location