G183214



Basic Information


Item Value
gene id G183214
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 7770429 ~ 7775182 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU208061
TTCCGGTCCAAAAAAGTTAAAATGCCTTTATTCACATCATGGCTAATCACAATAGAAACATTAAAAATAGCTAAAACACTGCACACTGATGCATTTCGGCCTTCAGCCTTCCTCAGAGTGTGTCAGGTATGCTGATACTTGACTTTCCCCCTTATGTCTGTGCAGATGATATTACAGCTGTTAGTTTGTAAATGAATGATTTCAATTTTCAAAGCAGCTGTCATTACTCAAAGGAAAATTAGACCAGTTTTTGGAATCAAGTGGTTGATATGTTTAAGAGGTGGACTAATATGTTGTGTTCACTTGGGAATAATGTCTATAGAAAATAACCAAGCTGACAAGCATGGCTTCTCTCCCCGTGTATTTTCATAGTGCAACAATTATCCCCAGTTTTCTCAGCCTTATTGTTTATAAATTCACCAAAGCACCCTGCTGGATCTCAAACATAATTAATGAACTAAAACGATGAAATATACAGAGAGAATCACATTCGGCTAGCACTCAGCATTGAGAGTTTGACTCTTTTTTTTTTTTTTGGTTTATTAATTTATCTTCATTTCTTTGGTAGACATCGTCTTTCTTACTGCTATAATATTGTGCTTCTGTAGTTATTTATTAAGTCTGGGTTTTTTTTTTTTTTTTTTGTGAAAAATAACTTTTCACAGTTCTGTCTCAAAGGAAGCAAAAAGTATTTAAGAAACTGAGAACATAAACTTTTTTCATTCTGTTTCAGTAGAACATTTTTGCACAATTTAAATGGTTTAGAAAACCAAAATCATCATTGCCATCTGTCAATGACTAACTTCATATAAACACGTAATGAGCTCAGTGGCGCCAAAGAAAGATGACAATGGCTGCATTATCAAATAAAGAAAACAATGTACAAACAATGTACAACACAAATTATTAGAACAAAACACTATCAATGGTGAACAACAAACAGACATTAATACAAAGGAATATCACAAATCAAATGATCGTTGATATCAAACTATTTGAAAGAGGGCGGAAAGCAATAAAAAAAATTAAAAAACCTAAGTCTTACAAAGCTAAGCCTTAAAAAAAGAAAAATTAAGAGAAACAGAAAAGGCACAATATTTAACAAAATGGTGAGCAATAATAAAGTTAGCCAAAACGTGCCGAGCAGCAAGATAATTAAAAAAAAGAAGAAAAAAAGAGTCCACTTAAGTTAAAAGACATTTCATCCAATGACAATCCCTCATCCAACACAACAACAAACACATTTTCAAATGGGTGCCAACAGATTAGGAGGGACATGAATAAAAGTATACAATAAAAGCAACATAACATATTAATATTTAAGAAGTTAATGATGATTAATTCCCAAAATAAGAAAATGATTAACAGGACATGAGGAGGTGAAACATGAAATGCTTTGTTGTATTTGTGGGTAAATGTATTAGTGGTGGAATATCATATTCATGTATGTACATGAGAGAAAGTGTGTGTGCTGCGGAAGTGTTGAGCCCTAGCGCGTATACACACGTTAGGTTGGCGTGCTACAAATCCCTGTTTACAGTGACATCTGAATGAACCATTGGTGTTGATACAGCGTGCATTCTTGCAGGGGCTTGACCTTGTCCCTCGGCCCGCACACTCATCGACCTGTACAGCGTGTTCGTGAGTGGTCCAGTACAAATCCAGTATTGCACTCGCACATCGTACCCAGATAGGACCGTACACACCGTCCATTAGCACAGCTACACTCATCTGAGTCTTCTTCTGAACTGTCTCCCTCTGAACACATGAGCGTGACAGAACGGATCATGAAACACTGCAATGTTTTTGAGTCTTTCTGTTAAGCTCAAGGTGAATAACACTGTTAAGGTCACCTGGGTTGTAGGAGAAAGCTGCCAGGAAGTCCCCCTCTCCATCAGACTCAGTCTCTAAATGCATCTCACATAACCTGTTAAAAAATACCTGAATTTCTGTTAGGACAGGTCCGGCACTCTGGGCCCCAGCCTCGACCGTAGTGACAGCAGCACTCGGAGTACGTCACCGTTAGCTCATTCCGCGGCAAAGTGCACATAAGATCCTCATCGACCTCCTGGAAGCATATGTCCTTATGTGCTGCGGTGCGGTCATCATAGACGCATTGCTTGAGGGCTGCACTGAAGGTGAGTGGCTGCTCGCAAATGCAGTGGAAGGAGCCGGGAGTGTTGACACATCTCCCGTTCCTACAGTAGGAGGGATCCTCACACTCATTCACATCTGAAAGGTGCACCACAGACACACCCGTTACTAAAGAGATATACAGAGAGAAGGACAGATAGAGAGAAAAAAGAAGGAGGGAGGAAGACAAGGAGAGAGAGATCAGAAGCACACAGTCTTGGGTGGGAACTTCAATAAATGTTTGGAGTTATTTCATCTTTACTATTCCAGGAAGAACAGTCAAATCCTCTGCCACATTACAACTATGCTTTACCTTTTGTATGCTACATTGTAAGAAGTCATAGCATCTGTTATTATGACGGTGATGATCTCATAAATCTATACTCACCCGCATGTTCCTCAGGTGTTACACAGCTGTTACGGTCAGTTGCCAGAATCCAGGGAGGAGTGCAGATGCAATAATAGGAATCTTGGGTGTTTACACAGTGGCCATTTTTGCAATTAGCA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU208061 True 2640 lncRNA 0.39 4 7770429 7775182

Neighbor


gene id symbol gene type direction distance location
CI01000039_07658015_07658757 NA coding downstream 111377 7657540 ~ 7659052 (-)
CI01000039_07619613_07632295 WDR44 coding downstream 138134 7618880 ~ 7632295 (-)
CI01000039_07592640_07593317 NA coding downstream 175376 7592548 ~ 7595053 (-)
CI01000039_07523213_07573865 LRCH2 coding downstream 194278 7523197 ~ 7576151 (-)
CI01000039_07498583_07505779 NA coding downstream 263827 7498503 ~ 7506602 (-)
CI01000039_07781930_07783389 NA coding upstream 6708 7781890 ~ 7783694 (-)
CI01000039_07908291_07909766 NA coding upstream 132722 7907904 ~ 7910468 (-)
CI01000039_07952703_07961286 NA coding upstream 177104 7952286 ~ 7962019 (-)
CI01000039_07987279_07996351 ARHGAP35 coding upstream 212030 7987212 ~ 7996921 (-)
CI01000039_08003424_08011297 NA coding upstream 228228 8003410 ~ 8012533 (-)
G183212 NA non-coding downstream 35519 7734543 ~ 7734910 (-)
G183154 NA non-coding downstream 175071 7595124 ~ 7595358 (-)
G183151 NA non-coding downstream 274103 7496060 ~ 7496326 (-)
G183150 NA non-coding downstream 274418 7495765 ~ 7496011 (-)
G183143 NA non-coding downstream 284944 7485119 ~ 7485485 (-)
G183231 NA non-coding upstream 1546 7776728 ~ 7777392 (-)
G183232 NA non-coding upstream 3149 7778331 ~ 7778642 (-)
G183233 NA non-coding upstream 4881 7780063 ~ 7780273 (-)
G183282 NA non-coding upstream 83103 7858285 ~ 7861483 (-)
G183311 NA non-coding upstream 117782 7892964 ~ 7893415 (-)
CI01000039_07134422_07137732 NA other downstream 632662 7134422 ~ 7137767 (-)
CI01000039_06647926_06651530 NA other downstream 1121853 6646544 ~ 6653449 (-)
G182827 NA other downstream 1135229 6634547 ~ 6635200 (-)
G182771 NA other downstream 1261996 6507955 ~ 6508433 (-)
G182470 NA other downstream 2133665 5636058 ~ 5636764 (-)
G183261 NA other upstream 196934 7972116 ~ 7975045 (-)

Expression



Co-expression Network