CI01000039_08003424_08011297


Basic Information

Item Value
gene id CI01000039_08003424_08011297
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 8003410 ~ 8012533 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000039_08003424_08011297.mRNA
AGATCAATCCTGGTAACAACACTGTGTTTGAAATCAACATTTAAGGTGTCATTTATTGGACAATTATTACATATTGTTTTGTGAATTGAAATATAGAGAACAGATACACAATAAACTTTCAATCATCTGGATTTTGTTAGACTTACTATGAGTATTTAAGTTTATATCACAAAAGACTGTGCTGATAAATAGACAATGCTTTTTCAAACCATTTTCTGCTGGAGTCAGTGCACTATGTGCAGCAAAAATAGGTTTAATATTGAATCTCTACTGTGTAGGCTACTCAATACACTGTGCTGCTTATGCAGGTGTATATAATACCATAACCTATTAATATGGGAGCTGAAATAAAAATACTCTGCTATCATGTATAACGTACAACAGGTCTCACACCATTTTATGATAAATGGCCGATATAAAAATATACTCAATGTAGTATACCAGAAATCACTTTATTTTGTTATATAGTGCTGCAGCTGCTGAAAGCACAATGTGTGTGATGTGAAACAGGCCTAAGATAAGTCTGGTCTCTTTATGAAAAACAGTACAACAAATTCAAGACAAACAATGCTTATAAGTGTAAAAATATGCAATTATATGCAATTAAATAGCTGAGATGTCCAAATTGCTCTGTCTCAACTCCATGCAACGTCTTTATAATGTCAATGTGTATGTATGTACACAAGTGCGTGTACGGGGTCATTTAAACACACATTTGAATATGGAGCAAGGGGTTCTTGCATGCTCACACATTAGGTCAAGCAAGACCAAAAAAGAAATAAATAAATGAATAAAATTGGCATTTTGGTGTCTTATCAGCACGTTTATGTCTCACATGGTAATGGTAATCCTCCAGTCCATATTTGTATCAGAAAAATCTGCATCACACACATTCAAAATATACTAGAAATGAGGATTACAATTTTTGAATGTTCTTAAATTGATTTGGCAATAAGAGAATGGTTCAAATTACCAATAATTTGGTAATTTGAACATCAAATTACCTTAAAATTATAACTGTACATACATTATGACAATATAATGTGGTAATATATGTACTAAACATTTACTCAGCAAATTACTGTTTTAAGGTGAAATCTGTACTTGTTAAACAGAAAAGCAGTCCCACTGCATAAAGCAGGGCCTTGAATAGGCCTATAAGACTTATCATAAATGTATAAACAATTCATTTGAAATCTGATTGGTAGTACAGTTGTTTACAGTGAATTTAAGTGAATGACGGATGAGAACGAACAGTTCCCGTCACAGAGAAGGCAAGCTCTCTCTTACAAGAGCAAAAGGTGTTGCTATGGAGGGTCTAGTGGTACTGTTGTTGTTGTAGTGTTGGTTGTAATCGCCATCTGGCTGGGAGTGCGTTATGGGCCGTCACTGTGGGCTCTCTCCGAGAGAGAAACAACAAAAGACACATGCCCCCCTTCATCCGTTGACTGTGATGGGAAGAGAGACTGTTCTCAAGGCACTGATGAATCTCGCTGTGTGCGGTTTGGTACAGCAAATGAATTGCAGGTCATGACCTCTAAGTCCGGGCTCTTCCTTCCAGTCTGCGCACAGGGCTGGAATAAAAACTTAGCTGACCAAACCTGCCAACAGCTTGGCTTTAGACAGAGTCATATATATGGTGTCTTGCAAACCAACTCACCCTCCTTTCAAAGTGTGAACAGTCAGTTTACAAACACCATCCAGGGGAGCGTTAACAGAAGTACGTCCTGTCCTGGTCAGCAGACCGTGTCCCTGAACTGCAGCAAATGTGGAAAGCCACCGGTCTCCACGAGGATCATAGGGGGAAGTGTGGCTGCTGACGGTCATTGGCCGTGGCAGGCCAGTCTGCATTTCCAAGGGTATCACACATGTGGAGGAACTCTGTTGGCTCAAGACTTCATCATTACAGCTGCTCACTGCTTCCCCAAAGAAACACCCGGCTCTCAGTTGCCTAGTAACTGGAAAGTGTATATTGGTTTGGTGTCCCAGCTCCAGCTTCCCAGCCCATATTTTGTAAAGCAAATCATTTTACATGAGAATTATGACCCAGCGACAAAAAACAATGACATCGCCTTGCTAAAACTCAATAATCCTGCCACCAGTAGTTCCACTTCTTTGATGGAGGTCAAAGTAGACCTGATAGACTCAACTGTGTGTAACTCACTTACTGTTTATGACGGACGAATCACTGAGAATATGCAGTGTGCAGGAGATCTTGGGGGAGGGAAAGACTCCTGCCAGGGCGACAGTGGGGGTCCATTGGTGTGTAAAGTTGATGATCAATGGTTTCTCACAGGCGTAACAAGTTGGGGAGATGGCTGTGGAAAGCAGAACCGTCCAGGGGTCTACAGTAACGTAGGGCGACTTTTAATGTGGATATATGGCAAGATGCAGGTTTTTAGCCAAAATTTGCTGAAAATTAAAACAGCACTACTGAAGACAAATTCTTTCCTCTCTGAAAAGAACAAACTGAGTATTCAGATGCTGATTTCACCTATGGCAAAAAGCTCAAATGTGGAAACAAGTCATCTGCTAAGTAAGGCACACACGATATTCATCTTGTAAAAAGATACAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000039_08003424_08011297.mRNA False 2579 mRNA 0.40 13 8003410 8012533

Neighbor

gene id symbol gene type direction distance location
CI01000039_07987279_07996351 ARHGAP35 coding downstream 6489 7987212 ~ 7996921 (-)
CI01000039_07952703_07961286 NA coding downstream 41391 7952286 ~ 7962019 (-)
CI01000039_07908291_07909766 NA coding downstream 92942 7907904 ~ 7910468 (-)
CI01000039_07781930_07783389 NA coding downstream 219716 7781890 ~ 7783694 (-)
CI01000039_07658015_07658757 NA coding downstream 344358 7657540 ~ 7659052 (-)
CI01000039_08022279_08026193 SCN4BB coding upstream 9366 8021899 ~ 8026193 (-)
CI01000039_08038068_08041738 NA coding upstream 24386 8036919 ~ 8041738 (-)
CI01000039_08062731_08064494 NA coding upstream 50060 8062593 ~ 8064494 (-)
CI01000039_08065500_08069266 NA coding upstream 52967 8065500 ~ 8069690 (-)
CI01000039_08102220_08109961 NA coding upstream 89445 8101978 ~ 8109961 (-)
G183328 NA non-coding downstream 26362 7975563 ~ 7977048 (-)
G183255 NA non-coding downstream 38027 7962056 ~ 7965383 (-)
G183319 NA non-coding downstream 80463 7922737 ~ 7922947 (-)
G183277 NA non-coding downstream 82772 7919713 ~ 7920638 (-)
G183316 NA non-coding downstream 104577 7895793 ~ 7898833 (-)
G183276 NA non-coding upstream 31498 8044031 ~ 8044365 (-)
G183333 NA non-coding upstream 34198 8046731 ~ 8046988 (-)
G183334 NA non-coding upstream 34805 8047338 ~ 8047596 (-)
G183269 NA non-coding upstream 36258 8048791 ~ 8050021 (-)
G183241 NA non-coding upstream 39150 8051683 ~ 8070531 (-)
G183261 NA other downstream 28365 7972116 ~ 7975045 (-)
CI01000039_07134422_07137732 NA other downstream 865643 7134422 ~ 7137767 (-)
CI01000039_06647926_06651530 NA other downstream 1354834 6646544 ~ 6653449 (-)
G182827 NA other downstream 1368210 6634547 ~ 6635200 (-)
G182771 NA other downstream 1494977 6507955 ~ 6508433 (-)
G183329 NA non-coding upstream 4340 8008824 ~ 8009050 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location