Gene
RNA
| Item | Value |
|---|---|
| gene id | G181106 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000039 |
| NCBI id | null |
| chromosome length | 8355537 |
| location | 4824469 ~ 4825437 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU205658 | False | 822 | lncRNA | 0.36 | 2 | 4824469 | 4825437 |
| TU205660 | True | 638 | lncRNA | 0.36 | 2 | 4824469 | 4825253 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000039_04738237_04759689 | NPR3 | coding | upstream | 64223 | 4738131 ~ 4760246 (+) |
| CI01000039_04616410_04621885 | EEF2L2, EEF2.1.L, EEF2.2, EEF2, MGC68699 | coding | upstream | 202584 | 4616410 ~ 4621885 (+) |
| CI01000039_04589265_04593416 | AKR1A1A | coding | upstream | 230897 | 4589047 ~ 4593572 (+) |
| CI01000039_04569279_04580845 | DNAJB5 | coding | upstream | 243521 | 4567494 ~ 4580948 (+) |
| CI01000039_04528742_04557188 | EPG5 | coding | upstream | 267145 | 4528742 ~ 4557324 (+) |
| CI01000039_04829464_04847182 | ZFR | coding | downstream | 3976 | 4829413 ~ 4848563 (+) |
| CI01000039_04849031_04849778 | NA | coding | downstream | 23453 | 4848890 ~ 4849992 (+) |
| CI01000039_04852902_04868261 | MTMR12 | coding | downstream | 27465 | 4852902 ~ 4868691 (+) |
| CI01000039_04871305_04881506 | GOLPH3 | coding | downstream | 45868 | 4871305 ~ 4881540 (+) |
| CI01000039_04903560_04912920 | NA | coding | downstream | 78123 | 4903560 ~ 4913077 (+) |
| G181129 | NA | non-coding | upstream | 329 | 4823877 ~ 4824140 (+) |
| G181120 | NA | non-coding | upstream | 37384 | 4786455 ~ 4787085 (+) |
| G181107 | NA | non-coding | upstream | 54230 | 4770024 ~ 4770239 (+) |
| G180256 | NA | non-coding | upstream | 193075 | 4630934 ~ 4631394 (+) |
| G180255 | NA | non-coding | upstream | 194538 | 4629277 ~ 4629931 (+) |
| G181156 | NA | non-coding | downstream | 144793 | 4970230 ~ 4971911 (+) |
| G181182 | NA | non-coding | downstream | 258754 | 5084191 ~ 5142030 (+) |
| G181410 | NA | non-coding | downstream | 407491 | 5232928 ~ 5233523 (+) |
| G181482 | NA | non-coding | downstream | 551752 | 5377189 ~ 5377486 (+) |
| G181483 | NA | non-coding | downstream | 568955 | 5394392 ~ 5395204 (+) |
| CI01000039_04223888_04224220 | EMC6.S, EMC6, EMC6.L | other | upstream | 599812 | 4223868 ~ 4224657 (+) |
| G180156 | NA | other | upstream | 732861 | 4090998 ~ 4091608 (+) |
| G180149 | NA | other | upstream | 744906 | 4079419 ~ 4079563 (+) |
| CI01000039_04048342_04049635 | NA | other | upstream | 774497 | 4048079 ~ 4049972 (+) |
| G179903 | NA | other | upstream | 1398914 | 3424037 ~ 3425555 (+) |
| CI01000039_07324920_07329407 | NA | other | downstream | 2495247 | 7324596 ~ 7329472 (+) |
| CI01000039_07898330_07904918 | DPF2 | other | downstream | 3070439 | 7896773 ~ 7905162 (+) |
