CI01000039_04738237_04759689 (NPR3)


Basic Information

Item Value
gene id CI01000039_04738237_04759689
gene name NPR3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 4738131 ~ 4760246 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000039_04738237_04759689.mRNA
CTTTAAAAAGCTCTTTGCAAAAAAGAAAAAAAAGTTACTTCGTTCATTGGTGTCAAAGATGTCATGTTTCATGTCACTATGTCTGTCCATTTGGGTAGTACTCATGATGCCTGGCAGGACAAGTGCACTGAATGACAACATCACTGTGATGGTCATGTTGCCTCTCAACAACACATACTTGTTCTCTTACCCGAGAGTTTCTCCGGCTATCGAGTACGCGAGAAAAACCCTCGAGAGCGTAGAACCCTTTGCAGGCTTGAAATTCAATGTGCGCTATGAGAACTCCGCGTGCGGGGTGGACGCTCTCTACGCGCTCGTGGACACGCAGGGAGACGAGCGTCCCAACCTGGTCCTCGGTCCTGTGTGCGAGTACGCGGCCGCGCAGGTGACGAGAGTGGCATCCCACTGGAACATCCCGGTGATCTCAGCAGGTGCTCTGGCCACCGGCTTCAGATTGAAAAACAGCGAGACGAGCGAGTACTCTCATCTCACACGAATCGCACCAACTTACCTGAAAATGGCTGAGACTTTTCAGGCGATATTCAAAAAATTCGCCTGGAGAACAGCGTATTTGATTTACGACGATGATAAAGACGAGAGAAACTGTTACTTTACGATGGAGGGGGTTTATATGGCGCTCTCAGACTACCACATCGTCACAGATTTCGCTGTGTTGAACTCGCAAGAGGAGAGAGTAGACGCCGACGGGATCATCACCTCCGTTTACGGGAGCGAAGTGGTGATTATGTGTGCCAAGGCGGACACAGTACGAGACTTCATGCTGGCATCTCATCGACGCAAATTAACCAGCGATAGCCACATCTTTTTCAACATTGAGCTCTTCAACTCCTCTTCCTATGGGGATGGATCCTGGAGGAGAGGAGACAAATATGACAATGAGGCCAAGGCTGCCTACAGTTTTCTCAACACTGTGACATTACTTAGGTCCACCAAGCCAGAGTTTGAAGTCTTCTCCGTGGAAATGAAAAAGTCACTACAGCAGTCGGGCATCCCCGTTTGTGAAAACTGCAGTGCTGTACCATACCTGGTAGTGACAGTGAGAATGCACTGGGTAATTTTTCACCGGGTGTTCCTCAGACCTTGCTCTTTTATTGCATTGCAGGTCAATATGTTTATGGAGGGGTTCCATGATGCTTTGCTTCTGTATGCAATTGCCTTGCGTGAGGTGATGAGTAACGGTCTGACGAAAAAGGATGGATTGAACATCACACACAGCATGTGGAACAGAACATTTGAAGGCATTGCTGGCCAGGTGTCTCTAGATGCCAGTGGTGACCGAAATGGGGATTTCTCTGTCATTAGGATGACAGATCCAGAGGCAGGAACGCACGAGACTATCATGAACTACTTCGGCACCAATGGAACTTTAGATACCATGCCGGGCTTTAAGAGGGAATGGTTCTCCTTGCGATCAGCACCAGAGCCACCACCCCCAAAACACATTGAACCATCATGTGGACTAGGTGTATCGGCAGTGACTGGGCTAATAGTAGGGGGAATTCTGGGAATGGCTCTCCTCATGGCATTCTACTTCTTTAGGAAGAATTACAGGATAACCATTGAACGGAGAACACCTCGAGAAGAGTGTGACATCGGAAAACACCGTCAGTTGCGGGAAGACTCCATCAGATCCAACTTCTCAGCAGCGTAGTCTGTAGTCGTAAGTCGACTGCTGGGGTGTTCGAATTCGGGGAAGGTGCATCTCAAATGAGTCTGTGGGCTCTTCAAACACCATCCCAGGAACCCAGAAATATTTATAGACATGCTGTAGTGTTTTTCTTTGTAAATGTTTCTTGCTCTTCAATTCGTAAACTCAGGAAAGTTGAATTATTGGAGGAGAAGTGCTCGCAAGGCTTCTTGACTCTCTGTAAAGAAAAATGGTCTTTTTTTTTATTTAGCTACAGACCTTTTTTTCCCTGCCAAACTCATCTTGAGGAAGATTCTGTAGAAGCCTGTCAATTTTGTAGAAAAGAGTGGGCTGACTTGAGTCCGGTCAGCCGCTGGGTTGGTGGGGAGAAGCGGTTACGAGATATTGAGGACTGTAAGAGTGATACTCAGAACTTAAGCTTATTTTAAACGTAACACTCTCCCCAGTGATCTCGGCATCACGTTACCTTCCTCTTCTTCGTTTAGAGAATGTCCAGTAGAACACACTGATAAACATCCATTCTTTCTTCTTTCTAGACTTGGGTCAGGAGGCACTGATGA

Function

symbol description
npr3 Acts upstream of or within cardiac muscle cell proliferation. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including heart; hypochord; nervous system; neural tube; and renal system. Human ortholog(s) of this gene implicated in hypertension. Orthologous to human NPR3 (natriuretic peptide receptor 3).

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K12325 NPR3; atrial natriuretic peptide clearance receptor

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000039_04738237_04759689.mRNA True 2229 mRNA 0.47 9 4738131 4760246

Neighbor

gene id symbol gene type direction distance location
CI01000039_04616410_04621885 EEF2L2, EEF2.1.L, EEF2.2, EEF2, MGC68699 coding upstream 116246 4616410 ~ 4621885 (+)
CI01000039_04589265_04593416 AKR1A1A coding upstream 144559 4589047 ~ 4593572 (+)
CI01000039_04569279_04580845 DNAJB5 coding upstream 157183 4567494 ~ 4580948 (+)
CI01000039_04528742_04557188 EPG5 coding upstream 180807 4528742 ~ 4557324 (+)
CI01000039_04523686_04528060 RIOK2, RIOK2.L, RIOK2.S coding upstream 210071 4523654 ~ 4528060 (+)
CI01000039_04829464_04847182 ZFR coding downstream 69167 4829413 ~ 4848563 (+)
CI01000039_04849031_04849778 NA coding downstream 88644 4848890 ~ 4849992 (+)
CI01000039_04852902_04868261 MTMR12 coding downstream 92656 4852902 ~ 4868691 (+)
CI01000039_04871305_04881506 GOLPH3 coding downstream 111059 4871305 ~ 4881540 (+)
CI01000039_04903560_04912920 NA coding downstream 143314 4903560 ~ 4913077 (+)
G180256 NA non-coding upstream 106737 4630934 ~ 4631394 (+)
G180255 NA non-coding upstream 108200 4629277 ~ 4629931 (+)
G180257 NA non-coding upstream 108918 4628976 ~ 4629213 (+)
G180214 NA non-coding upstream 142688 4593833 ~ 4595443 (+)
G180224 NA non-coding upstream 317185 4420600 ~ 4420946 (+)
G181107 NA non-coding downstream 9778 4770024 ~ 4770239 (+)
G181120 NA non-coding downstream 26209 4786455 ~ 4787085 (+)
G181129 NA non-coding downstream 63631 4823877 ~ 4824140 (+)
G181106 NA non-coding downstream 64223 4824469 ~ 4825437 (+)
G181156 NA non-coding downstream 209984 4970230 ~ 4971911 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other upstream 513474 4223868 ~ 4224657 (+)
G180156 NA other upstream 646523 4090998 ~ 4091608 (+)
G180149 NA other upstream 658568 4079419 ~ 4079563 (+)
CI01000039_04048342_04049635 NA other upstream 688159 4048079 ~ 4049972 (+)
G179903 NA other upstream 1312576 3424037 ~ 3425555 (+)
CI01000039_07324920_07329407 NA other downstream 2560438 7324596 ~ 7329472 (+)
CI01000039_07898330_07904918 DPF2 other downstream 3135630 7896773 ~ 7905162 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_031313 npr3 coding NC_007116.7 CM002889.2 41260478 ~ 41307550 (-)