CI01000039_04569279_04580845 (DNAJB5)


Basic Information

Item Value
gene id CI01000039_04569279_04580845
gene name DNAJB5
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 4567494 ~ 4580948 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000039_04569279_04580845.mRNA
GTATATATATATGGCTTTGTGTATTTTAGACAAAACGTTTTTTCAGTCAAACGGAAAAGATCAAACAAGCAAATAGCCTAAATGCAACATGACACTTTTTAAATGCATGCGTGTTTATGTGTGTAAATCGAAACTGCTCTGTATGATATGCTGAACATAAAAGTCTTTGTTAGTGTTTCTCGAGCAGTGTTTCTTTCTGCAGTGCCGCCCAAACGACACGCTCAAATGATCAAGAGCTGCACTCAGCGCTATACATACAGTTTCAAAAATGTCCTTCACGGTGCTGTGTAACACTAAAACCTTTCTTGGACACTATGAAATATGACTGTAGAATTTTGCTGTGTAATATTTATCTCTACTGCCTGTGTTTTTATGAATATCGCGGACACTGCAGCACATAGGCATAGCATAAGTAATATCAAACGAGCAGGAGTGCTGCTGTTCTTCATATCAGCACGTCTGAAATGCCGAAGACTGTGCCAGTATCTGTGCCCTACATAAGGGACCCCAGGGTGGCACTGGCCCCATCAGATTGACAGCTGGTCCACCCAATCAAATGAGACACAAAATAATTATTTTGTTGAAAAAGAAGAAATAAATCACACATACATGACAATAATAATTGCTCAAATACATGAATTTAGTGGATGTCACTCTCGAAACTTTGCAGCGTGTGTAGGCTACGTGGCCGCTGCAAACAAAACAAAAGATTTATTTAAATTCTGAACTAATATATCGCCTAGACTTTATCACTAAACAGCTGTCACTCATCTTAGTTCATTGGGAAGACGCAATCTCACAAAGTTCCGTTATAATCAATGAATCTGTCTACACTGCACAATGAATCTTTTATTTACATAATGTCTACACTTTTTTGTTATAAAGAGAGGATTTGCGAGCGTGCAGTTCAAAACTCTGGCTTTGAGCGGATTTTAACTTAAACGCCTCTGATTGGCCATTGCATTCAAGAAATCAACAGACATGTCTGCGATTGGCTACATTGCTCAACTCTGCAAAAAGGCTGTAAATAGAAACCTTTGACGTTCTGCATATTATTACCTTCATTTATTGTTCTTTTTTTTATTATTACACTGGTTATTTTATTAATTAATGGATTTTGTTATTTTCAATAAAGAGTTTGCTGACAATAAGTCATATTAAACTAATCTTAATTGCTAAATTATTTTTAGTCCATGTAGGCGTATTGTAAAATGTAATTTGAGAGTTAGCATTGAGGTCCACCTTATTTCACCAAGGTCCACTCACTTTAAAATGTCTGGCCTCGCCACTGGACTGTGCGTTTTATATTACTTAACAGTTCATTTAAACCTAAACAATATCAAGTACTTTAAGTGTAAAACACAAATTAGCCAATTAATTTGTATATTTCTGCCCCGTCAATGAAAAAATAGTTCCAAACCTTCTACGGCTCAGCGAGCAATGCACCGAAAAATGGAAAGTATTAAATAATCAATCGGGTGTAGATCCACTCTGTATTTTACATTTCACGCTTAACAGTGAGAAACCCACTCTGTGAGCGTTTATGGAGCAAAAGAAACACAAATGCTTCCTTTTAAGAAAACAAAACAACAACAACAACACTAAATGCAAACTCTACCAAAATGAAAAATTAATTATTTTTATGTTGACACTAAAAAGAATTTTCAATATAACCTGAATGCATTTTAATTTCTTTATTAGTTACCTTGTTTATTTTCACCTTTGTTTTGTAGAGAGCTTCTGGAAGTTCTGGTTCTGGAAGGACTCTATCTGTAAATTAAAGCCATGGGGAAGGATTACTATAAGATCCTTGGCATACCTTCAGGCTCTAATGAGGATGAAATCAAAAAAGCCTACAGGCGGATGGCCCTAAAGTTCCATCCAGACAAAAACAAGGATCCTAATGCTGAAGAGAAGTTTAAGGAAATAGCAGAGGCTTATGAGGTTCTGAGTGACCCAAAGAAGAGAGTGATCTATGACCAGTATGGCGAGGATGGTTTGAAAGCAGGTGGCACAGGCTCATCTAGTGGACAAGGGACTACATATCACTACACTTTCCATGGGGATCCACATGCCACCTTTGCTTCTTTCTTTGGAGGCTCCAACCCCTTCGATATATTCTTTGGCTCTGGACGCCAGCGAGGAACAACTAATGGCTTTGCAGACCATGGTGACCATGACATGGACATTGACATGGATGGAGATGATGATCCTTTCAGTTCCTTCAGTCACTTTGGCTTCAATGGTATCAACGGTTTTCATCATGGTGGAGGTCGAAGACATCGTAATGAGCAACTTCATAGCGGCCGAAGGAAAGTGCAGGACCCTCCGGTGGTACATGAGCTTAAAGTGTCTCTAGAGGAGATCTTCCACGGATGTACCAAGCGGATGCGAATCACTCGCCGACGACTGAACCAAGATGGAAGGACAATGAGGACAGAGGACAAGATCCTTAACATTGTCATCAAGAGAGGCTGGAAGGAAGGGACCAAGATCACCTTCCCCAAAGAGGGTGATGAGACACCTGAGAACATTCCTGCTGATATTGCATTTGTGCTCAAGGACAAAGGGCACCCACTCTTCAAAAGGGATGGCTCCAACATCATTTACACAGCCAAGATCGGTCTTAAGGAGGCTTTGTGTGGCTGCACAGTGAACATTCCCACCATTGACAACCGAGCGATCACATTGCCCTGCAACGATATCATCAAACCAGGCACAATCAAGAGACTGCGTGGAGAAGGCCTGCCTTTCCCAAAAAATCCATCCCAGCGTGGGGATTTGATAGTGGAGTTCCAGGTTGCAGTCATATTCGTCAATCCAAGTTATATTATAGGTTACATACAATTATTTGGCACTTCACATGGATCATACTAAACAAAAATCTTTGACCGAGACCGTCTTGGTCATGCGTACACAACATTTTACGATTTGGTCTAACAAATTGTTTTATTAACTGAGAAAAGAAATGTTTCAGTGA

Function

symbol description
dnajb5 Predicted to enable chaperone binding activity and unfolded protein binding activity. Predicted to be involved in chaperone cofactor-dependent protein refolding. Predicted to act upstream of or within protein folding. Predicted to be active in cytosol. Orthologous to human DNAJB5 (DnaJ heat shock protein family (Hsp40) member B5).

NR:

description
DnaJ-like protein subfamily b member 5

GO:

id name namespace
GO:0006457 protein folding biological_process

KEGG:

id description
K09511 DNAJB5; DnaJ homolog subfamily B member 5

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000039_04569279_04580845.mRNA True 2980 mRNA 0.40 4 4567494 4580948

Neighbor

gene id symbol gene type direction distance location
CI01000039_04528742_04557188 EPG5 coding upstream 10170 4528742 ~ 4557324 (+)
CI01000039_04523686_04528060 RIOK2, RIOK2.L, RIOK2.S coding upstream 39434 4523654 ~ 4528060 (+)
CI01000039_04495351_04521800 ATXN2 coding upstream 45175 4495351 ~ 4522319 (+)
CI01000039_04470958_04472248 ALKBH2 coding upstream 94845 4470910 ~ 4472649 (+)
CI01000039_04468348_04468960 NA coding upstream 98258 4468348 ~ 4469236 (+)
CI01000039_04589265_04593416 AKR1A1A coding downstream 8099 4589047 ~ 4593572 (+)
CI01000039_04616410_04621885 EEF2L2, EEF2.1.L, EEF2.2, EEF2, MGC68699 coding downstream 35462 4616410 ~ 4621885 (+)
CI01000039_04738237_04759689 NPR3 coding downstream 157183 4738131 ~ 4760246 (+)
CI01000039_04829464_04847182 ZFR coding downstream 248465 4829413 ~ 4848563 (+)
CI01000039_04849031_04849778 NA coding downstream 267942 4848890 ~ 4849992 (+)
G180224 NA non-coding upstream 146548 4420600 ~ 4420946 (+)
G180223 NA non-coding upstream 148843 4418248 ~ 4418651 (+)
G180212 NA non-coding upstream 157738 4409522 ~ 4409756 (+)
G180210 NA non-coding upstream 160214 4407023 ~ 4407280 (+)
G180166 NA non-coding upstream 315232 4249474 ~ 4252262 (+)
G180214 NA non-coding downstream 12885 4593833 ~ 4595443 (+)
G180257 NA non-coding downstream 48028 4628976 ~ 4629213 (+)
G180255 NA non-coding downstream 48329 4629277 ~ 4629931 (+)
G180256 NA non-coding downstream 49986 4630934 ~ 4631394 (+)
G181107 NA non-coding downstream 189076 4770024 ~ 4770239 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other upstream 342837 4223868 ~ 4224657 (+)
G180156 NA other upstream 475886 4090998 ~ 4091608 (+)
G180149 NA other upstream 487931 4079419 ~ 4079563 (+)
CI01000039_04048342_04049635 NA other upstream 517522 4048079 ~ 4049972 (+)
G179903 NA other upstream 1141939 3424037 ~ 3425555 (+)
CI01000039_07324920_07329407 NA other downstream 2739736 7324596 ~ 7329472 (+)
CI01000039_07898330_07904918 DPF2 other downstream 3314928 7896773 ~ 7905162 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_031317 dnajb5 coding NC_007116.7 CM002889.2 41542436 ~ 41560874 (-)