G180257


Basic Information

Item Value
gene id G180257
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 4628976 ~ 4629213 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU204681
CTTCAGTCTACAGTGTCACATGATCCTACAGAAATCATTCTAATATGATGATCTGGTGCTCAAGAAACATTTCTTTTTATTATCAACGCTGAAAACAGTTGTGCTGCTTAATATTTCTGTGGAAACCATGATTCATTTTTTCAAGATGTTTTATACAATATTTCCCATTCTGCATTTTTTGATGAACAGAAAGTTTCTTTATTAAAATAGAAATCAGTTGTAGTAGTATAAATGTCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204681 True 238 lncRNA 0.30 1 4628976 4629213

Neighbor

gene id symbol gene type direction distance location
CI01000039_04616410_04621885 EEF2L2, EEF2.1.L, EEF2.2, EEF2, MGC68699 coding upstream 7091 4616410 ~ 4621885 (+)
CI01000039_04589265_04593416 AKR1A1A coding upstream 35404 4589047 ~ 4593572 (+)
CI01000039_04569279_04580845 DNAJB5 coding upstream 48028 4567494 ~ 4580948 (+)
CI01000039_04528742_04557188 EPG5 coding upstream 71652 4528742 ~ 4557324 (+)
CI01000039_04523686_04528060 RIOK2, RIOK2.L, RIOK2.S coding upstream 100916 4523654 ~ 4528060 (+)
CI01000039_04738237_04759689 NPR3 coding downstream 108918 4738131 ~ 4760246 (+)
CI01000039_04829464_04847182 ZFR coding downstream 200200 4829413 ~ 4848563 (+)
CI01000039_04849031_04849778 NA coding downstream 219677 4848890 ~ 4849992 (+)
CI01000039_04852902_04868261 MTMR12 coding downstream 223689 4852902 ~ 4868691 (+)
CI01000039_04871305_04881506 GOLPH3 coding downstream 242092 4871305 ~ 4881540 (+)
G180214 NA non-coding upstream 33533 4593833 ~ 4595443 (+)
G180224 NA non-coding upstream 208030 4420600 ~ 4420946 (+)
G180223 NA non-coding upstream 210325 4418248 ~ 4418651 (+)
G180212 NA non-coding upstream 219220 4409522 ~ 4409756 (+)
G180210 NA non-coding upstream 221696 4407023 ~ 4407280 (+)
G180255 NA non-coding downstream 64 4629277 ~ 4629931 (+)
G180256 NA non-coding downstream 1721 4630934 ~ 4631394 (+)
G181107 NA non-coding downstream 140811 4770024 ~ 4770239 (+)
G181120 NA non-coding downstream 157242 4786455 ~ 4787085 (+)
G181129 NA non-coding downstream 194664 4823877 ~ 4824140 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other upstream 404319 4223868 ~ 4224657 (+)
G180156 NA other upstream 537368 4090998 ~ 4091608 (+)
G180149 NA other upstream 549413 4079419 ~ 4079563 (+)
CI01000039_04048342_04049635 NA other upstream 579004 4048079 ~ 4049972 (+)
G179903 NA other upstream 1203421 3424037 ~ 3425555 (+)
CI01000039_07324920_07329407 NA other downstream 2691471 7324596 ~ 7329472 (+)
CI01000039_07898330_07904918 DPF2 other downstream 3266663 7896773 ~ 7905162 (+)

Expression


Co-expression Network