G180224


Basic Information

Item Value
gene id G180224
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 4420600 ~ 4420946 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU204648
ATTACAAACCGTTCTCCGCCCGGAATTAGCCAACCGTGCCGACCCGTTCTGCTAGAATGCGAGTAGTGACGTCGTCACTCAGGATCGGCCTGGCTGCCGGTTTCTCCGTAGCTTGCTAAACATGATATTTGAGCAACATTAACACAAATTAATCATACAATTAAAAGAAATAACTGATCATCCTACATAACGCGGCCACTATTTACACCGCATATCGTGTGTAAACTCTTGCGTTACTAAGGCAATGACTGAAGAGCTCCGTTATCAGCCCCACAGTGGAAAACGAAACCATATCCGTACCGGCCGGCTCGGATCAGATCGGCACGGAATGGAACAGTAAAGCAAAG

Function

NR:

description
PREDICTED: YTH domain-containing protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204648 True 347 lncRNA 0.47 1 4420600 4420946

Neighbor

gene id symbol gene type direction distance location
CI01000039_04384983_04394003 NA coding upstream 26476 4384820 ~ 4394124 (+)
CI01000039_04370566_04373090 NA coding upstream 47138 4369627 ~ 4373462 (+)
CI01000039_04364813_04366029 NA coding upstream 54369 4364169 ~ 4366231 (+)
CI01000039_04295776_04307914 NCOR1 coding upstream 112686 4295776 ~ 4307914 (+)
CI01000039_04244908_04247540 CENPV coding upstream 173060 4244504 ~ 4247540 (+)
CI01000039_04422021_04434173 NA coding downstream 913 4421859 ~ 4434227 (+)
CI01000039_04446796_04449452 NA coding downstream 25611 4446557 ~ 4449457 (+)
CI01000039_04454768_04457234 NA coding downstream 33297 4454243 ~ 4457270 (+)
CI01000039_04468348_04468960 NA coding downstream 47402 4468348 ~ 4469236 (+)
CI01000039_04470958_04472248 ALKBH2 coding downstream 49964 4470910 ~ 4472649 (+)
G180223 NA non-coding upstream 1949 4418248 ~ 4418651 (+)
G180212 NA non-coding upstream 10844 4409522 ~ 4409756 (+)
G180210 NA non-coding upstream 13320 4407023 ~ 4407280 (+)
G180166 NA non-coding upstream 168338 4249474 ~ 4252262 (+)
G180196 NA non-coding upstream 176097 4244239 ~ 4244503 (+)
G180214 NA non-coding downstream 172887 4593833 ~ 4595443 (+)
G180257 NA non-coding downstream 208030 4628976 ~ 4629213 (+)
G180255 NA non-coding downstream 208331 4629277 ~ 4629931 (+)
G180256 NA non-coding downstream 209988 4630934 ~ 4631394 (+)
G181107 NA non-coding downstream 349078 4770024 ~ 4770239 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other upstream 195943 4223868 ~ 4224657 (+)
G180156 NA other upstream 328992 4090998 ~ 4091608 (+)
G180149 NA other upstream 341037 4079419 ~ 4079563 (+)
CI01000039_04048342_04049635 NA other upstream 370628 4048079 ~ 4049972 (+)
G179903 NA other upstream 995045 3424037 ~ 3425555 (+)
CI01000039_04829464_04847182 ZFR other downstream 423236 4829413 ~ 4848563 (+)
CI01000039_07324920_07329407 NA other downstream 2899738 7324596 ~ 7329472 (+)
CI01000039_07898330_07904918 DPF2 other downstream 3474930 7896773 ~ 7905162 (+)

Expression


Co-expression Network