CI01000039_04446796_04449452


Basic Information

Item Value
gene id CI01000039_04446796_04449452
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 4446557 ~ 4449457 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000039_04446796_04449452.mRNA
CTATATATTTGACCCTTGGGACACATTACTACATTACACATACACATACATTACTAGTGTTGAATTATAAGAATCATGTGACAGATCATGAGTGAATAAAAAAAATGTTTTTAGTAGGCTACCTTTTCACATGCAAGCTGAAACGCAGTCTGAGCTTGAACGGAAGTCCCAAAAATATTTATTTCTTAGAGTGGTGTTTGTAAGAACCACAGCTCATACTGCTGCTGCGCTTCTGAAAAATGGCATGTGTGAAAAGTGACCTTATGTTCTGGATAATAAGGATGCTTATTCTTGATGTTACATGTACATATGGTTTGAATGTATGTCGGGGAGATCTAATCTCCAATGTCAGTTTATCCACTGAGCTTCAATCTGAAGTCCTGCTTCCCTGTTCCTTTGAATCAGACCTCTTGAAATCAAACCGGACGAATGAATCTTGTGTGGTGTGGACTCACCTCAATACAGACTTTGTGGAGATCAGTCTGGATGGTGAGGCAAAATTCTGGAATAACCAACGTGGACGAATTGAGACATTCCCAAAATTACCAGAATCTGAATTGTTGGACTTCTCCATCCATATCCGTAATGTGCAGCAGTCTGATTTAGGTGTCTACCACTGCAAACTGTTCAGAGATACCAACTGTTTCCTCGCCTATAAGATAATTGAACTACAAAAACTACACAAAGCTGGAGCAGCAGGCGGAGGAGCAGTGCTACTTGTGCTCATCATAATCGCAATTAATCTTTTTAAACGTCAAGCTGTTGAAGAAGTAACCTATGCATCAATTATTTATAGGTCACACAACTCCCATGAGAGCAACGTTCTTGTGCATAACAACATTGACGGCTCCACTGAAGACTCGGTTCATGTCATTTCAGATACTGTCTTATACTCCACGGTCAAGAGAGGACATTAAAAGAA

Function

NR:

description
hypothetical protein cypCar_00015110

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000039_04446796_04449452.mRNA True 922 mRNA 0.40 5 4446557 4449457

Neighbor

gene id symbol gene type direction distance location
CI01000039_04422021_04434173 NA coding upstream 12330 4421859 ~ 4434227 (+)
CI01000039_04384983_04394003 NA coding upstream 52433 4384820 ~ 4394124 (+)
CI01000039_04370566_04373090 NA coding upstream 73095 4369627 ~ 4373462 (+)
CI01000039_04364813_04366029 NA coding upstream 80326 4364169 ~ 4366231 (+)
CI01000039_04295776_04307914 NCOR1 coding upstream 138643 4295776 ~ 4307914 (+)
CI01000039_04454768_04457234 NA coding downstream 4786 4454243 ~ 4457270 (+)
CI01000039_04468348_04468960 NA coding downstream 18891 4468348 ~ 4469236 (+)
CI01000039_04470958_04472248 ALKBH2 coding downstream 21453 4470910 ~ 4472649 (+)
CI01000039_04495351_04521800 ATXN2 coding downstream 45894 4495351 ~ 4522319 (+)
CI01000039_04523686_04528060 RIOK2, RIOK2.L, RIOK2.S coding downstream 74197 4523654 ~ 4528060 (+)
G180224 NA non-coding upstream 25611 4420600 ~ 4420946 (+)
G180223 NA non-coding upstream 27906 4418248 ~ 4418651 (+)
G180212 NA non-coding upstream 36801 4409522 ~ 4409756 (+)
G180210 NA non-coding upstream 39277 4407023 ~ 4407280 (+)
G180166 NA non-coding upstream 194295 4249474 ~ 4252262 (+)
G180214 NA non-coding downstream 144376 4593833 ~ 4595443 (+)
G180257 NA non-coding downstream 179519 4628976 ~ 4629213 (+)
G180255 NA non-coding downstream 179820 4629277 ~ 4629931 (+)
G180256 NA non-coding downstream 181477 4630934 ~ 4631394 (+)
G181107 NA non-coding downstream 320567 4770024 ~ 4770239 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other upstream 221900 4223868 ~ 4224657 (+)
G180156 NA other upstream 354949 4090998 ~ 4091608 (+)
G180149 NA other upstream 366994 4079419 ~ 4079563 (+)
CI01000039_04048342_04049635 NA other upstream 396585 4048079 ~ 4049972 (+)
G179903 NA other upstream 1021002 3424037 ~ 3425555 (+)
CI01000039_04829464_04847182 ZFR other downstream 394725 4829413 ~ 4848563 (+)
CI01000039_07324920_07329407 NA other downstream 2871227 7324596 ~ 7329472 (+)
CI01000039_07898330_07904918 DPF2 other downstream 3446419 7896773 ~ 7905162 (+)

Expression


Co-expression Network