CI01000039_04370566_04373090


Basic Information

Item Value
gene id CI01000039_04370566_04373090
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 4369627 ~ 4373462 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000039_04370566_04373090.mRNA
GCATAAAATTGCCGTGTGAACAAATAAAACTGATGCATCTTTCATGTGTTTATTAAACAAAGTTATATAACACCTAGTGTTCCAGTGTGGTTTCTTCCTTTAGATTAGGCACATAGCTTCAAACGAACACTTCCTGTAGTTATTTATGTTTCACTCTGCTGTGGCTCACTCCAGCTCAGTGGCAGATGTAGGCTTTTGAGCATGAATTGTATGTTTCAGGCTAGCCACAATATTTCAGTGGGGTTTCCAAAACTGTCTCAATCTATTCTAAGGCAGATCTATTTGTTTCAGATCCTTGTCTTGCTGCATGACCCATCTGTGCTTCAACTTCAGTCCAAAGACCGATAGCTTTACATTCTCCTGGAGAACTCATACAGATCAGATTTATAGTTCCTTTAATGATAGCAAGGCATCCAGATCCTGAAGCAGAAAAGCATCAGCGTTTAACTGCTGATAATAAGTGTTTTTATAAAATGAAAGTTAAAACTGAAAAGGAAAGAAATAGGCATCTAATCTGGATTCTATATGCTACAACAATGCACTGTTAAATCTGACTACATACTATGTTAAAACATTTTTACATAAACTTCTTGTACAGCACTTCAGTCTTGTTGTTGTTTGTTTTGTTTTCCAATTAATTAAAAGCAGATTAAAAATGCCTTGAAAATTATTTTCCATAAACCAGTTTTTCATTTAGAATCATCATTATAGAGTAGCTACTTACGTTTTGTTCATGCAGCATTTTTTTCAGCATTTTCAGGAAGTGACATGCTTAACAAATTCTCACCTCGCTGTACATGAACCCGGTGTTATTCAGCTGCATCTTCAGTGATCAGATGAGACATGAAGCTGTTTGAACTGTGTTTCTCTGCTGTGTGGATGTTGTGCTNNNNNNNNNNCCGGTGTTATTCAGCTGCATCTTCAGTGATCAGATGAGACATGAAGCTGTTTGAACTGTGTTTCTCTGCTGTGTGGATGTTGTGCTGCTTTCTAGTGTATGTTAAAGGTCATAATGTGTGTCAACAGAAGTTCATTTCAAGAGTCAATTTATTCACAGAACTACAGTCTGAAATCCTGCTGCCTTGCCTGTTTGAAGCAGCTCTCTTTGGATCAGACCTGACCATGAGTGCTGTCTGGGATCAGATTAGTACAACAGTTAATGGCATTGTAGAGATCCCAGTAAATCAACAGGAAAGATTCTGGAATCACAGAAATGGTAGAATTCAAACATTTCGTGATCGCTCTGGCTCTGGAAACTTCTCCATCCTGATCAGTAATGTGCAGCGCTCTGATCTTGGCCTCTACCGCTGTGAACTGTTCAGAGAGAGTAACTGTTCTCTGGCTTATAGAGAGATCAATCTCACTCTTGTTGAGATTTCACTGCTCAATAACTGGCAGCTCATAGTTGCAGCAGGAGGAGGAGGATTTCTGCTTCTCTGTCTGATCACTGTGTGTGTTTACTACACATGGACGAAACGAGAAACAGGTGATGAAATAACCTATGCATCAGTTACGCATAAGCCACACAACTGCCTTGACAGTAAAGGAGAAACAGTTAATGAAATAACCTATGCATCAGTTTCTCATAAGCCACACAACTGCCATGAGAGTAAAGTTCTTGTGAATAACAAGCCCATAAATGACTCTGCATCAGAACATGTCAGCTCAGAGACCGTCCTTTACGCTTCTGTCAAGAAAAGAGACAAGTGAGCAGCAAAACATCCAAATGAAAGAGAATTTTTTTTTAGATAACCCCTACTTTTATTCAAATCTATAGGTTTTTCTTTGCATCCTGAGTACTGTGAGAAGCTGACCAGTGATGGCACCAATCCACCAGAGCTTGTACAGTCTAACTTCTGATCTGTTCTTAAGTGGGAATTTATGTATTGTCATGTTAATGTTAACACAAATACATTTGTATTGTGATGGTTTTAAAAGTACTAGAGATGCAAATCATATTTTTAACTATATTTAACTAATTTAAATAACCAAAATGTAATATGTAGAAGACCCTAGAAGTAACATCATTTGGACCTTTTCTACAGCACCAGGGAAACAAAAGTAAATAATATTATCCATTTA

Function

NR:

description
hypothetical protein cypCar_00015110

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000039_04370566_04373090.mRNA True 2082 mRNA 0.38 6 4369627 4373462

Neighbor

gene id symbol gene type direction distance location
CI01000039_04364813_04366029 NA coding upstream 3396 4364169 ~ 4366231 (+)
CI01000039_04295776_04307914 NCOR1 coding upstream 61713 4295776 ~ 4307914 (+)
CI01000039_04244908_04247540 CENPV coding upstream 122087 4244504 ~ 4247540 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L coding upstream 144991 4223868 ~ 4224657 (+)
CI01000039_04198172_04200073 FAM222BA coding upstream 169467 4197246 ~ 4200160 (+)
CI01000039_04384983_04394003 NA coding downstream 11358 4384820 ~ 4394124 (+)
CI01000039_04422021_04434173 NA coding downstream 48397 4421859 ~ 4434227 (+)
CI01000039_04446796_04449452 NA coding downstream 73095 4446557 ~ 4449457 (+)
CI01000039_04454768_04457234 NA coding downstream 80781 4454243 ~ 4457270 (+)
CI01000039_04468348_04468960 NA coding downstream 94886 4468348 ~ 4469236 (+)
G180166 NA non-coding upstream 117365 4249474 ~ 4252262 (+)
G180196 NA non-coding upstream 125124 4244239 ~ 4244503 (+)
G180161 NA non-coding upstream 127264 4240313 ~ 4242363 (+)
G180195 NA non-coding upstream 130120 4239280 ~ 4239507 (+)
G180180 NA non-coding upstream 146901 4222478 ~ 4222726 (+)
G180210 NA non-coding downstream 33561 4407023 ~ 4407280 (+)
G180212 NA non-coding downstream 36060 4409522 ~ 4409756 (+)
G180223 NA non-coding downstream 44786 4418248 ~ 4418651 (+)
G180224 NA non-coding downstream 47138 4420600 ~ 4420946 (+)
G180214 NA non-coding downstream 220371 4593833 ~ 4595443 (+)
G180156 NA other upstream 278019 4090998 ~ 4091608 (+)
G180149 NA other upstream 290064 4079419 ~ 4079563 (+)
CI01000039_04048342_04049635 NA other upstream 319655 4048079 ~ 4049972 (+)
G179903 NA other upstream 944072 3424037 ~ 3425555 (+)
CI01000039_04829464_04847182 ZFR other downstream 470720 4829413 ~ 4848563 (+)
CI01000039_07324920_07329407 NA other downstream 2947222 7324596 ~ 7329472 (+)
CI01000039_07898330_07904918 DPF2 other downstream 3522414 7896773 ~ 7905162 (+)

Expression


Co-expression Network