CI01000040_00366809_00384965


Basic Information

Item Value
gene id CI01000040_00366809_00384965
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 366709 ~ 385259 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000040_00366809_00384965.mRNA
TTATTAAGAACGAGGTTAGTTGGTATGCTCTCTAGGTATGGAAAACTGGTCTTAATTTTAGTCACAATTTAATTATGTGATATATGCCACAACAAACACAATGAAGTGCTTCGGTTGCGGTGAAAATGGACACCTTATTCGTGGTTGTCCAAAAAGAGTGGAAAATGCAACTGTACCAATTGTTGTTTTAAAAAATGTAGCCGAAGTGCAGAATGATATCGCTGCAGTTGTTGAGGAGATGCCGGGTCCAAGTAGGGCATCAGTCGTTGCAGAATCTGTGAAAAATAGTGCAGAGTGTCTGGAAGGAAAAATGGTTGAGAAAGACAGAGATAGAAAAGTCTTTTTGAAAGTGACGAAAAATTTGAAAAAGGTAAAAATAGGAGAGTATTTTCCAGACATTGTACAGTTTATTGAAAAGAGATGCACATGTAAAAAGAACAAGGCCGTTGATCCATCCTATAACTTTGAACATTCAGTATCAAATGGGAAGTCACTCTACTAGTCTATTGCAATCTTTACACACTGTTCAGAAAAATGGGTTTTAATTTAATTGTTTTTTTCACTCTCAGTGGAGTTTTATGCTTCTCAGCTCTGCAGTAACTATGGTTACCTTGTCTGAGAGATATTCTGATATGCCCTCTTTTTTCCCCAGCACATTAGCAGTTCCCTTTTCTCTCACTCTCACTCCTTAATAATGAGCAGTCTGGCGGTCAAATTTTTGATGAAATTATCATTCTTTAACAAGTAACCCATTATTTAGATGATGATGGGACATAACTGTGGTTCTGGTTTACAA

Function

NR:

description
gag-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000040_00366809_00384965.mRNA True 796 mRNA 0.37 3 366709 385259

Neighbor

gene id symbol gene type direction distance location
CI01000040_00347516_00350540 NA coding upstream 16108 347516 ~ 350601 (+)
CI01000040_00240852_00305487 GABRB2 coding upstream 61222 240849 ~ 313275 (+)
CI01000040_00178642_00181455 NA coding upstream 184518 178604 ~ 182404 (+)
CI01000040_00512880_00513451 NA coding downstream 127621 512880 ~ 513597 (+)
CI01000040_00554753_00561571 NA coding downstream 169494 554753 ~ 562993 (+)
CI01000040_00643738_00689792 STK32B, STK32A coding downstream 258479 643738 ~ 689918 (+)
CI01000040_00839831_00841736 NA coding downstream 454572 839831 ~ 841736 (+)
CI01000040_00849226_00851895 NA coding downstream 463967 849226 ~ 851915 (+)
G183603 NA non-coding upstream 9034 357433 ~ 357675 (+)
G183465 NA non-coding upstream 19795 346374 ~ 346914 (+)
G183459 NA non-coding upstream 29676 336819 ~ 337033 (+)
G183456 NA non-coding upstream 34064 332419 ~ 332645 (+)
G183649 NA non-coding downstream 13774 399033 ~ 399304 (+)
G183650 NA non-coding downstream 14403 399662 ~ 399893 (+)
G183705 NA non-coding downstream 63981 449240 ~ 449601 (+)
G183708 NA non-coding downstream 66459 451718 ~ 451946 (+)
G183724 NA non-coding downstream 94935 480194 ~ 480404 (+)
G183420 NA other upstream 201787 157543 ~ 164922 (+)
G183366 NA other upstream 306312 53691 ~ 60397 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other downstream 588854 977184 ~ 978163 (+)
G184003 NA other downstream 845033 1230292 ~ 1236489 (+)
G185296 NA other downstream 2948319 3333578 ~ 3333983 (+)
G185884 NA other downstream 3353728 3738987 ~ 3739281 (+)
G185947 NA other downstream 3588506 3973765 ~ 3974123 (+)

Expression


Co-expression Network