CI01000040_01728828_01731709 (KIF4A)


Basic Information

Item Value
gene id CI01000040_01728828_01731709
gene name KIF4A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 1727772 ~ 1732232 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000040_01728828_01731709.mRNA
GTATATAAAGATGCATGATAATCACTTTAAGTGTAGTTCAGGACTTAGGCCTGTTGGATAAACCTTACTCTTACAAGTAAGTCATCTAATGTTTTTTAAAGACTGATCTTGAGTTTTAGCAGGAATTCTGCTTGTCTTTAAAAGGTTTTAAAAAGTCCCCCGTCTACAAATTAAGGTCTTAAACCAGAGCAGAAAGTCTTACTTTTGTAAAGTGATGGCATTAAATGTTAAATGCATTGCAAAAATGTATGTCTTATAAAGTGTTTTTGTCCTGTTTTCCAATACAAGTACCTATAAACACACTTGAATCAAGATGCATTTACTTGAGATGCAAAATGAAGATATGTAGTCTTATTTTCTGAGAAATTGAACAAAATTAAGTGAGTTTACACTTAAAACCAAAACAAATATCTCAGTTGGGCTTGGGGACTGGTTTTCCCTTTAAGTTGATTTGTTTTCAGAGCCAATTTGCAGATATTTGTTCTTGTTTTAGTCATAAACTTATTCATTTTGATTAGTTTCACAGAAAACAAGACTTGTTTGTTTCTCTATGTATCCAGATTTAAGAATCTTTAGACATTTGAGCTGGAAAACAAGATAAAAATACTGCACATTAAGAACAATTTTTTGCAGTGTGATCAGAAAGTACAGTAAAAGTTAGATCCATATTCTAGTAGTTCTAGTATTTTTTTTTTTGTTTGTTTGTTTTTTTGTTAAATTGTTTTAAAAAAGATAATGGAGATGGGTAGGAGGTTGTATTTTGAAACTTAAAAGTAATGCTACTGACAAGCGTCAGCTGTTTTGTCTAAAGTTGTTCAAGATTGTCAATTTTTCACATAATATGCATTGTGAATTTGACAGCTTTGAGCTTGTTTAGTGCAGCAGACTTTCCCTGGTGTCTTTGTTTGATCAGACTAATTATACTTAGACAATATTAATATAATGGCAGTTCCTAACCAGTCTGGACTTGTCTTTCTCTCTACACACTGGCTTTATGCAAGATCATTATGCGAGTTGGGTTGTGATTTGTGATTGAGCCTCATTTGCTCTTCCAGCATGACCAAGGAGGATGAGAAGGCCATTCCTGTGAGGGTTGCACTAAGATGTCGGCCTCTGGTTCCCAAAGAGATCAATGAAGGGTGCCAGTGCTGTCTTAATTTTGTACCGGGTGAACCTCAGGTCATTGTTGGCAATGACAAGGCGTTCACATATGATTATGTGTTTGACCCCACAACAGAGCAGGAAGAAGTTTTTAACACCGCTGTCTCCCCTTTGTTGTCCGGGCTTTTTAAAGGTTATCATGCCACCGTTCTGGCCTATGGACAGACAGGGTCGGGGAAGACATTCTCTATGGGCGGCACATACACATCAGAACAAGAGAACGAGCCTACAGTTGGAGTCATCCCGCGAGTGATACAACGAATCTATCAGGAAAAGTCTAAATGTGCAGACTGTGAATTTCTGCTCGCTGTATCTTACCTTGAGATTTACAATGAAGAGATACTGGACCTGCTCTGCACGTCAAAGGACAAACCCGTCATCAGCATCAGAGAGGATCCTAAAGACGGCATCAAAATTGTAGGACTGACAGAAAAGGATGTGTTCACCGCTGAAGAGATGGTGAGCTGTCTTGAGTTGGGGAACTCAGCACGAACAGTGGGCTCAACAGCCATGAACGCAGCCTCATCTCGCTCGCATGCCATCTTTACCATATCACTGGAGCAGCGACGCAAAGGAGACAAGTATGTGAACTTAGCACGCGCTGTTAAACTGAGCAACTTGTAGTTGTTTGGAGGCTGTCAAATTTGAGAGCTGGCTGTATAATGTGTTTAAGGTTTTATAGAATTGTGGAAAATGGGCTAAGCTGTGCCTAATTTGTCACAAGATTATATATTTAAAATGGACACACATACAGCCTGTGTTTGAAAGATGCACATGAGAAAAGTGACAAGCTTTTTATTTTTTATTTTTTTTTATTTTTGATGCAATAAGGTGCTAATGGAAGTAAAGGTAAAAGAAATTTTCAAAGAAAATTTCTTTTGTCTAAAAATATATTATGGTGAATTGCTAATGTATAAAACTGTAAAATGTTTGGCTATGATTGGAGGAAAAAAAAAAAAAAAAATGTAAATGAGTAATTTGTTTGTAAAGGAATGATGTCATGGTCTCCAAACTGCACTTGGTGGATCTCGCTGGATCTGAAAGACAAAAAAAAACTAAAGCAGAGGGAGATCGGCTCAAAGAGGGTGAGTGCAATCAAAGATCCATGTTTATTTATATTATTGCCAGTTTACTTCATTTTGAAGAA

Function

symbol description
kif4a Predicted to enable microtubule motor activity. Involved in mitotic cytokinesis and mitotic spindle midzone assembly. Located in midbody and nucleoplasm. Implicated in non-syndromic X-linked intellectual disability 100.

GO: NA

KEGG:

id description
K10395 KIF4; kinesin family member 4

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000040_01728828_01731709.mRNA True 2308 mRNA 0.37 5 1727772 1732232

Neighbor

gene id symbol gene type direction distance location
CI01000040_01707444_01725985 NA coding upstream 1787 1707281 ~ 1725985 (+)
CI01000040_01706518_01706939 NA coding upstream 20538 1706518 ~ 1707234 (+)
CI01000040_01604128_01609619 DKC1, DKC1.L coding upstream 118058 1604128 ~ 1609714 (+)
CI01000040_01579092_01597460 TMLHE coding upstream 129292 1579012 ~ 1598480 (+)
CI01000040_01553258_01557964 NA coding upstream 167605 1553258 ~ 1560167 (+)
CI01000040_01760148_01802721 AMMECR1 coding downstream 27916 1760148 ~ 1803002 (+)
CI01000040_01876498_01878546 FUNDC2 coding downstream 144266 1876498 ~ 1879308 (+)
CI01000040_01882704_01887004 BRCC3 coding downstream 149561 1881793 ~ 1887135 (+)
CI01000040_02315449_02344137 GABRQ, GABRB4 coding downstream 583217 2315449 ~ 2344313 (+)
CI01000040_02444252_02460962 NA coding downstream 711329 2443561 ~ 2460962 (+)
G184236 NA non-coding upstream 29136 1698123 ~ 1698636 (+)
G184235 NA non-coding upstream 31818 1695593 ~ 1695954 (+)
G184234 NA non-coding upstream 33572 1693802 ~ 1694200 (+)
G184231 NA non-coding upstream 36013 1691422 ~ 1691759 (+)
G184229 NA non-coding upstream 38105 1689456 ~ 1689667 (+)
G184268 NA non-coding downstream 137901 1870133 ~ 1870342 (+)
G184276 NA non-coding downstream 165000 1897232 ~ 1897596 (+)
G184295 NA non-coding downstream 214257 1946489 ~ 1946692 (+)
G184297 NA non-coding downstream 224297 1956529 ~ 1956873 (+)
G184324 NA non-coding downstream 295849 2028081 ~ 2112062 (+)
G184003 NA other upstream 491283 1230292 ~ 1236489 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other upstream 749609 977184 ~ 978163 (+)
CI01000040_00240852_00305487 GABRB2 other upstream 1450917 240849 ~ 313275 (+)
G183420 NA other upstream 1562850 157543 ~ 164922 (+)
G183366 NA other upstream 1667375 53691 ~ 60397 (+)
G185296 NA other downstream 1601346 3333578 ~ 3333983 (+)
G185884 NA other downstream 2006755 3738987 ~ 3739281 (+)
G185947 NA other downstream 2241533 3973765 ~ 3974123 (+)
G187510 NA other downstream 4236813 5969045 ~ 5971732 (+)
G188149 NA other downstream 5076459 6808691 ~ 6809130 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location