CI01000046_04279865_04297801 (EPN2)


Basic Information

Item Value
gene id CI01000046_04279865_04297801
gene name EPN2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 4279865 ~ 4297801 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_04279865_04297801.mRNA
ATGCCAAGCTCAACTATTCGGAGGCAAATGAAAAATGTGGTAAATAACTATACAGAGCCAGAGAAGAAGGTCAGGGAAGCAACTTCCAATGACCCGTGGGGCCCCTCCAGTTCTCTGATGTCAGAGATCGCCGACCTCACTTACAATGTGGTGGCCTTTTCGGAGATAATGAGCATGATTTGGAAGAGGCTGAATGACCATGGAAAGAACTGGCGGCATGTGTACAAGGCCCTGACGCTGCTGGACTACCTGATCAAAACGGGCTCCGAGCGAGTGGCCCTGCAGTGCAAAGAGAACATCTTTGCCATACAGACGCTGAAAGATTTCCAGTATATCGATCGGGACGGCAAAGACCAGGGCATCAACGTCAGAGAAAAGTCCAAGCAGCTGGTGGTGCTTCTCAAGGATGATGACCGTCTGAAGGGTGAGCGCTCTCAGGCCCTGAAGACTAAGGAGCGCATGGCACAGGTCGCCACCAGTGTGGGCAGCAACAATCAGATCAGCTTCGGCCGTGGCTCCAGCCAGCCCAACCTCTCCACCAGCTACTCGGAAGAGTACGGCAAGTCTGAGGGCTCACCTGCATCATATCATGGATCCACATCTCCCAATGCATCTTCAGAGTTGGAGCAAGCTAGGCCTCAGACGAGTGGAGAAGAGGAGCTACAGTTGCAATTGGCTCTTGCCATGAGTCGAGAGGCTGCCGAGCAGGAGGAGAGGATGCGTCGTGGGGATGACCTACGGCTCCAGATGGCTCTGGAAGAAAGCCGTAAAGACACCAACGCAGGGAAAGTGGCCAAGAAGAAGAAAGAGCCTCCACAGTCTTCTCTGATGGATCTGATGGACCCGGTTCTCGAGGGCCCTGCCGCTCAAGCGGCGGACCCTTGGGGAGCAGGTGCTGCAGCAGCAGTCCCCGCCTCAGACCCCTGGAAGTCCTACGGCTCCGCCCCTAAGCCAGCTGCTCCTGTGGATCCCTGGGGTCTTCCCAGTGCCTCTCCCTCGGTCACTCCTCTGAAGAGCAGTGACCCCTGGGGGTCGACCTCGGCTCCTGCAGCTGCTGATCCCTGGGGCCCAATGCCTGCCACCCGCCCCAAAGCTCCTGCCACAGTTGGGAGCTTTGATCTTTTTTCCACACCAAATGGTACTTCCAGGGAGGACCTCTCCGAGTTTGACAGTCTTCGCTCTTCAGCACTGACAGGTGATGGTAGAGGAAGTTCTGCCTTGCCATCGCAGACCAGCTTGTCTGTAGGCTCAGATCTGTTTGACGTACCGAGCGGCCCAACCAGAAAAACTCCAGAGTCTTTCCTGGGTCCCAACGCTGCTCTTGTCAACCTAGACTCTCTGGTCAGCAAGCCTCTCCAGCAGCCTCCAGTCTCCAACCCCTTCCTTGCTGCAGCCTCAGGAGCAGCTTCAGCTCCTGCTCCTGCACCTGCCGCTCAAATCAACCCCTTCCAGGTGAACCAGCCACAGCCGCCCACCCTCAACCAGATGAGAGTCAGTCCCATGATGGGCCTGAGCGGTCAGGGCTTCAGCAGCATGGCCCAGAGAAGCAACGATCCCCTGCCTCTGTCTTCAATGCCCCCAGTTGGTCCCGTCTCAATGGTACCCATTGCCGGCATGGCTCCTCTTGGGCCTGTGGGCCAGATGATGCCAAACATGGGGATCCCAGCATCCATGTCCATGCCCCAGCCGCTCATGAGCGGAGGGCTGCCGCCCACGGGCGCAGCAACACAAGCCGGCGGCACAACCAACCCCTTCTTATTG

Function

symbol description
epn2 Predicted to enable clathrin binding activity and phospholipid binding activity. Predicted to be involved in endocytosis. Predicted to be located in cytoplasm. Predicted to be part of clathrin vesicle coat. Predicted to be active in endosome and plasma membrane. Orthologous to human EPN2 (epsin 2).

GO:

id name namespace
GO:0030128 clathrin coat of endocytic vesicle cellular_component

KEGG:

id description
K12471 EPN; epsin

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_04279865_04297801.mRNA True 1761 mRNA 0.57 8 4279865 4297801

Neighbor

gene id symbol gene type direction distance location
CI01000046_04136250_04185791 CACNA1H, CACNA1HA coding downstream 94017 4135855 ~ 4185848 (-)
CI01000046_04125918_04128585 CCDC97 coding downstream 151280 4125887 ~ 4128585 (-)
CI01000046_04021483_04023514 GFER coding downstream 256351 4020458 ~ 4023514 (-)
CI01000046_04013708_04017841 SYNGR3, SYNGR3A coding downstream 262024 4011908 ~ 4017841 (-)
CI01000046_03967726_03970443 NA coding downstream 309152 3967457 ~ 3970713 (-)
CI01000046_04329752_04335164 PRPSAP2 coding upstream 31083 4328884 ~ 4335164 (-)
CI01000046_04336982_04343632 NA coding upstream 38904 4336705 ~ 4344054 (-)
CI01000046_04345411_04345806 NA coding upstream 47401 4345202 ~ 4345806 (-)
CI01000046_04352237_04355463 ALDOAA, ALDOA, ALD, ALDOAB coding upstream 54048 4351849 ~ 4355491 (-)
CI01000046_04374630_04379582 NA coding upstream 76709 4374510 ~ 4379588 (-)
G198522 NA non-coding downstream 23978 4255688 ~ 4255887 (-)
G198520 NA non-coding downstream 29540 4249088 ~ 4250325 (-)
G198515 NA non-coding downstream 35619 4243541 ~ 4244246 (-)
G198505 NA non-coding downstream 180245 4099160 ~ 4099620 (-)
G198487 NA non-coding downstream 198537 4080745 ~ 4081328 (-)
G198532 NA non-coding upstream 60998 4358799 ~ 4359095 (-)
G198533 NA non-coding upstream 61925 4359726 ~ 4359969 (-)
G198535 NA non-coding upstream 66400 4364201 ~ 4364493 (-)
G198538 NA non-coding upstream 72940 4370741 ~ 4371363 (-)
G198544 NA non-coding upstream 86182 4383983 ~ 4384495 (-)
G198265 NA other downstream 479764 3665243 ~ 3800101 (-)
CI01000046_02866255_02867695 MRM2, FTSJ2 other downstream 1412071 2866070 ~ 2867794 (-)
G196463 NA other downstream 2111221 2168266 ~ 2168644 (-)
CI01000046_00777923_00780186 RPC11, POLR3K, POLR3K.S other downstream 3499572 774434 ~ 780293 (-)
G195098 NA other downstream 3603737 670736 ~ 676128 (-)
G199054 NA other upstream 1799558 6097359 ~ 6097674 (-)
G199014 NA other upstream 2066377 6364178 ~ 6375406 (-)
G199130 NA other upstream 2280179 6577980 ~ 6594210 (-)
G199181 NA other upstream 2528884 6826685 ~ 6830453 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location