Gene
RNA
| Item | Value |
|---|---|
| gene id | G198476 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000046 |
| NCBI id | null |
| chromosome length | 7063170 |
| location | 4057464 ~ 4057814 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU225277 | True | 351 | lncRNA | 0.39 | 1 | 4057464 | 4057814 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000046_04021483_04023514 | GFER | coding | downstream | 33950 | 4020458 ~ 4023514 (-) |
| CI01000046_04013708_04017841 | SYNGR3, SYNGR3A | coding | downstream | 39623 | 4011908 ~ 4017841 (-) |
| CI01000046_03967726_03970443 | NA | coding | downstream | 86751 | 3967457 ~ 3970713 (-) |
| CI01000046_03951775_03952660 | BUD31, BUD31.L, BRAFLDRAFT_113775 | coding | downstream | 104421 | 3951181 ~ 3953043 (-) |
| CI01000046_03946243_03948935 | CPSF4 | coding | downstream | 107920 | 3946230 ~ 3949544 (-) |
| CI01000046_04125918_04128585 | CCDC97 | coding | upstream | 68073 | 4125887 ~ 4128585 (-) |
| CI01000046_04136250_04185791 | CACNA1H, CACNA1HA | coding | upstream | 78041 | 4135855 ~ 4185848 (-) |
| CI01000046_04279865_04297801 | EPN2 | coding | upstream | 222051 | 4279865 ~ 4297801 (-) |
| CI01000046_04329752_04335164 | PRPSAP2 | coding | upstream | 271070 | 4328884 ~ 4335164 (-) |
| CI01000046_04336982_04343632 | NA | coding | upstream | 278891 | 4336705 ~ 4344054 (-) |
| G198469 | NA | non-coding | downstream | 348 | 4049900 ~ 4057116 (-) |
| G198460 | NA | non-coding | downstream | 7724 | 4031795 ~ 4049740 (-) |
| G198457 | NA | non-coding | downstream | 26141 | 4030781 ~ 4031323 (-) |
| G198459 | NA | non-coding | downstream | 29526 | 4027654 ~ 4027938 (-) |
| G198426 | NA | non-coding | downstream | 46139 | 4010740 ~ 4011325 (-) |
| G198477 | NA | non-coding | upstream | 296 | 4058110 ~ 4058940 (-) |
| G198481 | NA | non-coding | upstream | 6859 | 4064673 ~ 4067219 (-) |
| G198483 | NA | non-coding | upstream | 12279 | 4070093 ~ 4070693 (-) |
| G198485 | NA | non-coding | upstream | 16856 | 4074670 ~ 4078448 (-) |
| G198486 | NA | non-coding | upstream | 20907 | 4078721 ~ 4079777 (-) |
| G198265 | NA | other | downstream | 257363 | 3665243 ~ 3800101 (-) |
| CI01000046_02866255_02867695 | MRM2, FTSJ2 | other | downstream | 1189670 | 2866070 ~ 2867794 (-) |
| G196463 | NA | other | downstream | 1888820 | 2168266 ~ 2168644 (-) |
| CI01000046_00777923_00780186 | RPC11, POLR3K, POLR3K.S | other | downstream | 3277171 | 774434 ~ 780293 (-) |
| G195098 | NA | other | downstream | 3381336 | 670736 ~ 676128 (-) |
| G199054 | NA | other | upstream | 2039545 | 6097359 ~ 6097674 (-) |
| G199014 | NA | other | upstream | 2306364 | 6364178 ~ 6375406 (-) |
| G199130 | NA | other | upstream | 2520166 | 6577980 ~ 6594210 (-) |
| G199181 | NA | other | upstream | 2768871 | 6826685 ~ 6830453 (-) |
