XLOC_009449 (irgq2)


Basic Information

Item Value
gene id XLOC_009449
gene name irgq2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 38150465 ~ 38154616 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018561
TTTTGTGTTTCAGCCGTTTTTCTGTGGTCCACCACACTGGTGTCACTCTGTATGATCTGAAAACAGATTCATTCTCATTAACTCCACCAACATGGCTGACGTGATAAAGGGTCTCAACCTGCTGGAAACACTGAAAGAGTCCATCGAGAAGAACAACATCTCCGATATTCGAGATGCACTGGAGGACATGCTAATCAGCAGAATCAACATCGCCATCGCTGGGGAAAGAAATGCAGAAAAAGCCACTTTCATCAACTCTCTCCGAGGCCTGAGCCAAGAAGATGAAGGTGCAGCCCAAAATCCACCATCTGCCGCCCCAGAAGAACTAGCCGTATTCACCAATCCCAAACACCCAGATTTCCGCCTCTGGGATCTTCCACCAATCTCTAGCGATGCTAATTTCAAACCAGAGGATTACATTGAGCGTTTTAAAGCTACACGCTACAATGCTATCATTCTCACATCCACCGACAGACCTAGCGCCAACAGCGTTGCGGTATGGAAGGAAGTTAGATCACTTCAGAAAGAGACTGTTTACTTTGTATTATTAGCATCTGTGAAAGACACCGAGAAATCACTGGAGGCGAAAAAGGCGGCAAGTTTAGATGTCCTTAAAGCAGAAGGTGTTCCTCTGCCAAAGGTGTTTCTAGTGCAACCGTCCGCCCTAGAGAAGCTGGACTTTCTCACATTTTTAGAGGTCATGAGAGGAGATCTTCCGGAGATTCGAGCCCATGCTCTTCTTCTGGCGCTTCCTACGTTTTCAAGCTCATTGGTCACTCAGAAGAAAGACGCCTTTAAGGCATTGGTGTGGGCCGCTGCTTCATTATCTGGTGGTGTTTCTGCTATTCCAGTACCACTGGTGTCCTCAATGGTGGATGCTACAGTGGGCGTCCGGATTTTGGTTAAAGCTCAAATCTCGCTTTGTTTAGATGACGAATCTTTACAGCGACTGGCAAGACAGCGGGGTCTAGATCCAGCCAAGCTGAAGGCCCTGCGCACATGCGCTCTTTCTGTTGAGGTCAGCAAGAGCGAGGTTAAAAGACGGCTGGCGGAGGCTGAGAAAGACACCAGCACTGCGACCACCAGACTCGTGGAGCTGGCCATCCCGAGACAAGCCAGATCCGTCAGCCGATCCTTCACGGTGATGCTCCAAGCGCTCAATAATGCAATCGATGATATGGGTGCTGATGCTGAgaaggtggttgctatggtgactGGAGAGCGACAGTAGATTGAGAATGCACAAAATGCTGCTTATAATCaacttgtatttatatttatattcccTTAAATGGACTGGACATCTAAGCAAAATGTTAATAGTCgagtaaaa

Function

symbol description
irgq2 Predicted to enable GTP binding activity. Predicted to be located in membrane.

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0005525 GTP binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-051212-7 Predicted to enable GTP binding activity. Predicted to be located in membrane.

Ensembl:

ensembl_id ENSDARG00000068657

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018561 True 1333 mRNA 0.47 2 38150465 38154616

Neighbor

gene id symbol gene type direction distance location
XLOC_009448 si:dkey-24p1.1 coding downstream 20620 38101135 ~ 38129845 (-)
XLOC_009447 si:dkey-238d18.6 coding downstream 141121 38008502 ~ 38009344 (-)
XLOC_009446 si:dkey-238d18.15 coding downstream 221330 37927949 ~ 37929135 (-)
XLOC_009445 si:dkey-238d18.5 coding downstream 228467 37891045 ~ 37921998 (-)
XLOC_009444 CR944667.3 coding downstream 269578 37876716 ~ 37880887 (-)
XLOC_009450 si:dkey-24p1.7 coding upstream 2871 38157487 ~ 38177768 (-)
XLOC_009451 chrna10a coding upstream 25288 38179904 ~ 38193383 (-)
XLOC_009452 rhoga coding upstream 47348 38201964 ~ 38218320 (-)
XLOC_009453 NA coding upstream 141541 38296157 ~ 38297734 (-)
XLOC_009454 trpc2a coding upstream 184770 38339386 ~ 38361787 (-)
XLOC_009432 CR848836.1 non-coding downstream 421299 37727834 ~ 37729166 (-)
XLOC_009422 CR848749.2 non-coding downstream 886200 37259354 ~ 37264265 (-)
XLOC_009420 AL953844.1 non-coding downstream 1276099 36874251 ~ 36874366 (-)
XLOC_009419 NA non-coding downstream 1365692 36784479 ~ 36784773 (-)
XLOC_009455 NA non-coding upstream 270932 38425548 ~ 38425845 (-)
XLOC_009456 NA non-coding upstream 393211 38547827 ~ 38550804 (-)
XLOC_009457 NA non-coding upstream 747317 38901933 ~ 38910271 (-)
XLOC_009458 NA non-coding upstream 793807 38948423 ~ 38952429 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000095_05492994_05494133 IRGQ2 coding CI01000095 null 5492994 ~ 5494225 (+)