CI01000049_03844455_03850424 (GPALPP1)


Basic Information

Item Value
gene id CI01000049_03844455_03850424
gene name GPALPP1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 3844455 ~ 3850430 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000049_03844455_03850424.mRNA
CAACAGAGGCATCATGAAAGATGAGATGGATATAAAGCAAACCGATAAACATGAGGAGGAGGATGATGATGATGGTTTCTTTGGTCCAGCGCTTCCCCCAGGATATCAAAAGCGAGCCAAGTCACCAGAAGAGCCACCTTTACTTGGACCTGCACTCCCTCCAGGATTTAATAAACAAGATCATGATGAAGATGAAGATGACGATGGTGCAAAAGATGACACCAGAGGACCAGCTCTACCCCCAGAATATCAAAAGCAAGACAGATCTCCTGAACGCAGACCACCTACAATAGGACCTGCTCTACCTCCAGGCTTTAAAAGACAATATGAAGATGAAGAGGGGGAAAAAGAAGATGCCGAAGGATTTTCAGGACCAGCTCTACCACCAGGTTATACTCCAGATTTGTCAAGCAGTGAAGAAGAAGATGATTATGTCATTGGGCCCATGCCATCAGCAGGACCATCCCAGGACTCCGTGGCTTTGGACATTGAAAGAAGAGCTCAAAGAATGAAAGACAAACTCACAGGAGTGGATACTGGCCCCAAAGTGGTCTCCAGAGAGAGCTGGATGACAGAGTTGCCTCCTGAGTTGCAGCATGTGGGCCTGGAAGCACGGACCTTTAAGAAAAGATCAGGTCCTGAAAACAAAGACCGCACAATCTGGACTGACACTCCCGCTGACCGTGAGAGAAAAGCGAGGGAGCGACAAGAGGCTAAGGAAAAAGGTGAATCCACCAAGGATGATGGACCTCGCCTGTCTCAGATTGATCTTGAGATGGCTGAAAAAGTTTCAAAATATAATGAGACCAAGCGTGGTGAATCTCTCATCAGTCTGCACACTAAGAAGATGAAGAGAAAAGCTGAGGAGGATGCTAACAAGCCTGTTGAGAGAAAACCATTCGACAGAGACACGGACCTCCAAGTCAATCGCTTTGATGAGGCTCAGAAAAAAGCTCTGCTCAAGAAGTCACAAGAGCTGAACACCCGCTTTTCACACAGCAAAGAACGCATGTTCCTGTGAGGGACA

Function

symbol description
gpalpp1 Orthologous to human GPALPP1 (GPALPP motifs containing 1).

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000049_03844455_03850424.mRNA True 1027 mRNA 0.47 6 3844455 3850430

Neighbor

gene id symbol gene type direction distance location
CI01000049_03843068_03843461 NA coding upstream 910 3842852 ~ 3843545 (+)
CI01000049_03756695_03758838 KLF12 coding upstream 85160 3756423 ~ 3759295 (+)
CI01000049_03631096_03632219 KCTD12.2 coding upstream 212085 3629377 ~ 3632370 (+)
CI01000049_03593799_03605097 SLC5A7 coding upstream 237964 3593727 ~ 3606491 (+)
CI01000049_03584412_03585910 ARL6 coding upstream 258356 3582032 ~ 3586099 (+)
CI01000049_03852103_03860363 GTF2F2A coding downstream 1673 3852103 ~ 3860774 (+)
CI01000049_03872066_03885573 NA coding downstream 21636 3872066 ~ 3886240 (+)
CI01000049_03893675_03894085 NA coding downstream 41749 3892179 ~ 3895169 (+)
CI01000049_03951470_03952048 NA coding downstream 100892 3951322 ~ 3952173 (+)
CI01000049_03961350_03962120 NA coding downstream 110849 3961279 ~ 3962949 (+)
G208019 NA non-coding upstream 132521 3710751 ~ 3711934 (+)
G207989 NA non-coding upstream 202902 3641252 ~ 3641553 (+)
G207889 NA non-coding upstream 216281 3627949 ~ 3628174 (+)
G207876 NA non-coding upstream 252618 3591457 ~ 3591837 (+)
G206829 NA non-coding upstream 473117 3371097 ~ 3371338 (+)
G208071 NA non-coding downstream 49279 3899709 ~ 3901473 (+)
G208090 NA non-coding downstream 71996 3922426 ~ 3922879 (+)
G208095 NA non-coding downstream 81934 3932364 ~ 3932589 (+)
G208096 NA non-coding downstream 82842 3933272 ~ 3933626 (+)
G208098 NA non-coding downstream 89630 3940060 ~ 3940304 (+)
G207888 NA other upstream 220144 3624002 ~ 3624311 (+)
CI01000049_01840330_01843844 FGF8B other upstream 2000627 1839815 ~ 1844077 (+)
G208074 NA other downstream 26966 3877396 ~ 3882211 (+)
CI01000049_04473766_04475768 GM10043, LSM6, SNRPF, BRAFLDRAFT_125735 other downstream 623095 4473662 ~ 4476270 (+)
G209660 NA other downstream 3027703 6878133 ~ 6882030 (+)
CI01000049_07219171_07224229 NA other downstream 3368418 7218811 ~ 7224268 (+)
G210091 NA other downstream 4023320 7873750 ~ 7878856 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_000410 gpalpp1 coding NC_007112.7 CM002885.2 34685405 ~ 34694365 (+)