Gene
RNA
| Item | Value |
|---|---|
| gene id | G208098 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000049 |
| NCBI id | null |
| chromosome length | 9665442 |
| location | 3940060 ~ 3940304 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU236126 | True | 245 | lncRNA | 0.22 | 1 | 3940060 | 3940304 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000049_03893675_03894085 | NA | coding | upstream | 44891 | 3892179 ~ 3895169 (+) |
| CI01000049_03872066_03885573 | NA | coding | upstream | 53820 | 3872066 ~ 3886240 (+) |
| CI01000049_03852103_03860363 | GTF2F2A | coding | upstream | 79286 | 3852103 ~ 3860774 (+) |
| CI01000049_03844455_03850424 | GPALPP1 | coding | upstream | 89630 | 3844455 ~ 3850430 (+) |
| CI01000049_03843068_03843461 | NA | coding | upstream | 96515 | 3842852 ~ 3843545 (+) |
| CI01000049_03951470_03952048 | NA | coding | downstream | 11018 | 3951322 ~ 3952173 (+) |
| CI01000049_03961350_03962120 | NA | coding | downstream | 20975 | 3961279 ~ 3962949 (+) |
| CI01000049_03972425_03973129 | NA | coding | downstream | 31942 | 3972246 ~ 3973847 (+) |
| CI01000049_04000506_04009508 | USP38 | coding | downstream | 59797 | 4000101 ~ 4009726 (+) |
| CI01000049_04064603_04090446 | GAB1 | coding | downstream | 124299 | 4064603 ~ 4090446 (+) |
| G208096 | NA | non-coding | upstream | 6434 | 3933272 ~ 3933626 (+) |
| G208095 | NA | non-coding | upstream | 7471 | 3932364 ~ 3932589 (+) |
| G208090 | NA | non-coding | upstream | 17181 | 3922426 ~ 3922879 (+) |
| G208071 | NA | non-coding | upstream | 38587 | 3899709 ~ 3901473 (+) |
| G207995 | NA | non-coding | upstream | 73517 | 3660881 ~ 3866543 (+) |
| G208110 | NA | non-coding | downstream | 208277 | 4148581 ~ 4151769 (+) |
| G208130 | NA | non-coding | downstream | 226780 | 4167084 ~ 4167339 (+) |
| G208144 | NA | non-coding | downstream | 267065 | 4207369 ~ 4207846 (+) |
| G208173 | NA | non-coding | downstream | 378088 | 4318392 ~ 4318643 (+) |
| G208176 | NA | non-coding | downstream | 436952 | 4377256 ~ 4381607 (+) |
| G208074 | NA | other | upstream | 57849 | 3877396 ~ 3882211 (+) |
| G207888 | NA | other | upstream | 315749 | 3624002 ~ 3624311 (+) |
| CI01000049_01840330_01843844 | FGF8B | other | upstream | 2096232 | 1839815 ~ 1844077 (+) |
| CI01000049_04473766_04475768 | GM10043, LSM6, SNRPF, BRAFLDRAFT_125735 | other | downstream | 533221 | 4473662 ~ 4476270 (+) |
| G209660 | NA | other | downstream | 2937829 | 6878133 ~ 6882030 (+) |
| CI01000049_07219171_07224229 | NA | other | downstream | 3278544 | 7218811 ~ 7224268 (+) |
| G210091 | NA | other | downstream | 3933446 | 7873750 ~ 7878856 (+) |
| CI01000049_08326623_08329601 | NA | other | downstream | 4387648 | 8326285 ~ 8329915 (+) |
