CI01000049_08707784_08716438


Basic Information

Item Value
gene id CI01000049_08707784_08716438
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 8706001 ~ 8716635 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000049_08707784_08716438.mRNA
GTATATAAGAATATAAGAACAGTTATGACCAATAAAAATGTATTTGTACTCTTTTAAACTAGAGTTGCAGGTACATTTATCTCTTAACACACAAAATAAAAAATGTCAGTGCAGGTGTTTGTTGTTGTTGCAGGGTATATCTACATGACAACAATGTAGGCTACTAAAAGCAGAAAAGTTTTTTCTTTGTGTTTTTTAAGTATAGATGACAACGTTGTCAAAACGATCCCCGTTCACATGGATCTGTGAAAACGTCTCACCAGGCCAGTAGTTGGCGATGCCACTTTGTAAAGAAAAACTACGTGCCTATAGACTGAAAACGTAATATGCATGCACATGCACATGACATCACCATTTTCACAAATTCACGTTTTTGTAGTTTTCAGAAGTTTACGGTTTCAGGCCCCCAAAATGAACAGACAAAATGCATAAAAAGTTTTTTTTAGTTTTTTGTTGAAAACTGTGTTGTGTAAATGGCCCATCAAGTAGTGCACTATTGTTGTTGTTGCGTTTCTTCTGTTTCTATCTGACTGGCAGGACCAGTGTTGCCACCTTGTGGACTAATTTGCTTTTAGAAAAATTGTGCTGTACACATGAAGAATGTACGTACAGAAGTGATGACAAAATTTTACGTCATATGTGTTGTATACTTTTGGTTTCACCCATAACACACATTGTCGCCACCTACTGGTGTAACCTGTAGAAAGGACCACTGAACAAATCAGTGATCTAATCTTACTGATGAACAAATTCAAAAGATTCAGGCCACTTACAGTAATTGGAAACTCACACTAGCGCCGAATGGTTTAAAATTTAAAACATTTACACTTCTAAATGACAAAAAAAAAAAAAACAACAACATTTAAACAGAATAGGATCAATAAAGAGAAAAAAGAGGGATACATTGGCCAAAATAACATCTGAATAACATGTGGGTGGTACCTCATCGCATTGTCGAGGCCCTCAAATGGCGCTTTTACACTGCATGATACAGTTCGTTACGGTTCGGTACGACTCACTTTTTGCCGCTTTTCCACTGCATGGGATGGCTCAGTATGGAACAGTACAGCTCGCTTCCAAGCGTGCTGTACCGATACTAAATGTGACATGTAAACACTGCAGGTCACTGATTGGTCAGAGAGAATCGTCACTACCAGCGTCATTGGATTTGAAACACGAGACACCAAACCCGCTAGATTTAAATAGTCAGTAACAGCCACTGCAGCAGTGTTGCCAAGTCTGTAGTTTTCCCGCATAATTGGGCTACTTTTACACTGTTGACGCGGGTTGAATCAACCCCAAATTACCTTGTTATTTAGCCCAAGGAATGCAAATTTTACCAGGGGAGCCCCGCCAAAAAACATAGATTTTACTCCACGGAACGCGCTTTTTACTGTGGGACCCCCCCTGAAATGCAATTGGGCTAGGTTTGAGGAGCATTTGGGCAGGTTTTGTTGTGAAAACCTGGCAACCCTGCACTGCAGTATCATTTGTTTGCGAAACGACTTACTTTAAACGACCGTCGCACGCAACTTGAAAAAAGAAATGGCTGTATCGTGGTCAGTAGACGAGGAGCGGATCCACGGCAGTAGAGGCGGCGCAACTATACTAGCAGTCTATAATCCCACCCATTTTGAAGCAGTACTAAACTGCACTGGAAAAGCAAACCGAAAGTAAAACAAGCCGAGCCGTGTCGTACTGAGCCGAGCCGAGTGGTGCCACGCAGAGGAAAAGCGTCAAAAGTTTTCCCTATACCACTAGATACCATGTCTCACTCAGAGGCATGAATTCCCCAAATATATCTTCACATCCCCCAACTCAGTCTCAGCAGGACATCAGGAGGGGCGTCCTCCATAAGAGGACACTGGGCCCAAATCCACCGAGAGACCACGTGCGTATTACTCACAGCCTCAGTCGGGGTGACACGGTAAGAGAGAGAGGGATAGTGGGAGGAACGATTGGAGGAGAGATCCCGAAGTTAGAGAGGCAAGAAGAGCCAGTTGAATCAAAATGGCTTGTCAAAGTTGAAACTGCAATCAAACAACTATTGTGCATGACGGGGGTACAGATGGCCCTTAGACGCACAGGACTAATCTGGGTGATTAGCAGGTTGCAACAGAGACACAGAGAGACTGGAAGAGTCACAGAAAGGTGTAGAAGTGGGCGTCCTTTGGCCACATCCCATGCTGATGACCGCTTCATTGTGAACAGTGCCCTGCGGAACCGGATGATGAATGCCACTCAACTCCAGGCATACTTAAGGGAGATGAGAGGCACCCGAGTGTCGCATCAGACCATTCGAAACCGCTTACATCAGCATGGTCTGCGTGATAGACAACCTGCAAGGGTACCTGACCACACCACCAGGCACAGGCGTCATCGTCTTGCATGGGCCAGGGAGCATTTGCGCTGGACAAGGAACCAGTGGGCCTCAGTGCTGTTCTCTGATGAAAGTCGATTCACATTGAGCAGAAATGATGGCCGCCAACCCTGTTGGAGACGTCAAGGAGAACGCTATGCATCAGCCACTGTTGTCACCAGACGAGCCTTTGGAGGTGTTACAGTCTGGGCAGGCGTGTCTAGTCAATTCAGAACTGCCCTACACCTTGTGAATGGTACTGTGACAAGCCAATACTACCTGAATAACATCATTAATCCTGTCATTGTGCCTCTGCATGAGCAACACAGGCCTGATCTCATCTTCATGGATGACAATGCCCCAGAGGTCACATCATCGGGGAACGGCTGCTGGAGGCTGGGAACCTTGAGGAAGAATGCTGACAGGCCCAAACAGCCTCCAGTCCAGATGCACCGCCTCGGCTCCATCAATCTTCTCCCTGTACTCGCCTACAGACTCTTTCTCACAGACACACACATTCACTCATCTCAGCTCTCTTACACACATACTCCAAAACCACCAGAATGGCATAGATAAATAAACATATAGCATACAATATGTATGTGTAGGCTATATACAGTAAATACTCAGCTAATCTTTTATTAGGGCTGTATATTTATTAATAATAATAATAATAAATACTTAAAATAAAATTCAAATAAATGTTTAAATCTGATTTCAGTGACTGTCTACCCTCAGGGAGGAACTCGCTTGTCACTAGACAAGGAATTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000049_08707784_08716438.mRNA True 3132 mRNA 0.44 4 8706001 8716635

Neighbor

gene id symbol gene type direction distance location
CI01000049_08454444_08471856 SUCLG1 coding upstream 234145 8454342 ~ 8471856 (+)
CI01000049_08426993_08448781 NA coding upstream 256927 8426993 ~ 8449074 (+)
CI01000049_08357834_08391102 NA coding upstream 314764 8357699 ~ 8394596 (+)
CI01000049_08336944_08342116 NA coding upstream 363860 8336944 ~ 8342141 (+)
CI01000049_08332719_08335569 NA coding upstream 370206 8332535 ~ 8335795 (+)
CI01000049_08918472_08920408 LRRTM1 coding downstream 201719 8918354 ~ 8920583 (+)
CI01000049_08933819_08935755 LRRTM1 coding downstream 217066 8933701 ~ 8935930 (+)
CI01000049_09421372_09430717 ADRA1D coding downstream 704584 9421219 ~ 9431606 (+)
CI01000049_09532855_09551543 RNF24 coding downstream 816220 9532855 ~ 9554478 (+)
G210369 NA non-coding upstream 44799 8660980 ~ 8661202 (+)
G210270 NA non-coding upstream 473048 8232719 ~ 8232953 (+)
G210241 NA non-coding upstream 474060 8231251 ~ 8231941 (+)
G210262 NA non-coding upstream 550941 8154659 ~ 8155060 (+)
G210545 NA non-coding downstream 302032 9018667 ~ 9018976 (+)
G210424 NA non-coding downstream 400412 9117047 ~ 9261427 (+)
G210625 NA non-coding downstream 482474 9199109 ~ 9228087 (+)
G210666 NA non-coding downstream 547414 9264049 ~ 9264288 (+)
G210674 NA non-coding downstream 563412 9280047 ~ 9280295 (+)
CI01000049_08326623_08329601 NA other upstream 376086 8326285 ~ 8329915 (+)
G210091 NA other upstream 827145 7873750 ~ 7878856 (+)
CI01000049_07219171_07224229 NA other upstream 1408939 7218811 ~ 7224268 (+)
G209660 NA other upstream 1823971 6878133 ~ 6882030 (+)
CI01000049_04473766_04475768 GM10043, LSM6, SNRPF, BRAFLDRAFT_125735 other upstream 4229731 4473662 ~ 4476270 (+)

Expression


Co-expression Network