G208937


Basic Information

Item Value
gene id G208937
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 5570006 ~ 5570324 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU237056
CAATTGTATGCACAAAATGAGCTCATTTCTAATTTGATGCCTGCTACAGGTCTCAAAATAGTTGGGACGGGGGCATGTTTACTATGGTGTAGCATCTCCTCTTCTTTTCAAAACAGAATGAAGATGTCTGGGCATCGAGGTTATGAGTTTCTGGAGTTTTGGTGTTGGAATCTGGTCCCATTCTAGCCTGATATAGGTTTCCAGCTGCTGAAGAGTTTGTGGTCATCTTTGATGTATTTTTTCATTTAAAGATGTGCCAAATGTTCTCTATAGGTGAAAGATCTGGACTGCAGGCAAGCCAATTCAGCACCGGAACTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU237056 True 319 lncRNA 0.42 1 5570006 5570324

Neighbor

gene id symbol gene type direction distance location
CI01000049_05489957_05511003 GALNT7 coding upstream 59003 5486522 ~ 5511003 (+)
CI01000049_05431306_05477613 GALNTL6 coding upstream 91829 5431306 ~ 5478177 (+)
CI01000049_05319353_05347573 GALNTL6 coding upstream 222368 5318886 ~ 5352037 (+)
CI01000049_05273122_05279358 NA coding upstream 290589 5272691 ~ 5279417 (+)
CI01000049_05089807_05098784 SPARCL1 coding upstream 471023 5089807 ~ 5098983 (+)
CI01000049_05620218_05631333 NA coding downstream 49894 5620218 ~ 5631333 (+)
CI01000049_05878283_05898645 WDR17 coding downstream 307959 5878283 ~ 5899011 (+)
CI01000049_05910501_05913204 SPCS3.L, SPCS3 coding downstream 340177 5910501 ~ 5913261 (+)
CI01000049_06307987_06341121 NA coding downstream 735860 6306184 ~ 6341341 (+)
CI01000049_06385432_06392281 NA coding downstream 814201 6384525 ~ 6392981 (+)
G208932 NA non-coding upstream 10475 5559248 ~ 5559531 (+)
G208930 NA non-coding upstream 13193 5556593 ~ 5556813 (+)
G208928 NA non-coding upstream 16512 5553260 ~ 5553494 (+)
G208927 NA non-coding upstream 17755 5552045 ~ 5552251 (+)
G208925 NA non-coding upstream 26730 5543041 ~ 5543276 (+)
G208942 NA non-coding downstream 12145 5582469 ~ 5582753 (+)
G208945 NA non-coding downstream 24034 5594358 ~ 5595077 (+)
G208816 NA non-coding downstream 71864 5642188 ~ 5645096 (+)
G208819 NA non-coding downstream 74973 5645297 ~ 5645722 (+)
G208823 NA non-coding downstream 75487 5645811 ~ 5647526 (+)
CI01000049_04473766_04475768 GM10043, LSM6, SNRPF, BRAFLDRAFT_125735 other upstream 1093736 4473662 ~ 4476270 (+)
G208074 NA other upstream 1687795 3877396 ~ 3882211 (+)
G207888 NA other upstream 1945695 3624002 ~ 3624311 (+)
CI01000049_01840330_01843844 FGF8B other upstream 3726178 1839815 ~ 1844077 (+)
G209660 NA other downstream 1307809 6878133 ~ 6882030 (+)
CI01000049_07219171_07224229 NA other downstream 1648524 7218811 ~ 7224268 (+)
G210091 NA other downstream 2303426 7873750 ~ 7878856 (+)
CI01000049_08326623_08329601 NA other downstream 2757628 8326285 ~ 8329915 (+)

Expression


Co-expression Network