CI01000050_06735445_06742619 (ESPN)


Basic Information

Item Value
gene id CI01000050_06735445_06742619
gene name ESPN
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 6735389 ~ 6743262 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_06735445_06742619.mRNA
AGAGATTGTTATTAGACACTATGTACAACAACCTTTTGTTTCCTGGCACTGCAATGTATTGTGGGACTAAAACTTAAAGAGCAGAGGCCACTTTTGGTCAAGTAGATTATGTTATATAACAATCTTAAATTTAATAAGTTCCATATTTTCACATCATAAGTCTCATAAAATCCCGTTGGCCCTCATTTGCCAGCCACTATCGTTCTTTCAGTCAAATTCACCAAATTTGCCGCAAAGAATTATGATCATTAGAATTGTTATTACAATATATTGTGAATGTGAATTTTCATTTACTATTTTCTACACATAGCAGTGGGTCAAGGCATTTGAATAATGTACGTTTTAAATAATTTTGATGGTTGAAACTTCAACAAAGGCCTGAACATTTTTCTTTTTTGAGCTTTACTTTTAGTCCTTTCTTTTTTATACTTTATTCAGTGTGTGTATTAATTTAATTAGTAACTGTTTAGTACTAGCACAGTTACCGAGTGCTTTAGACATTTGTTTAGATGTCTGGGGTTTTAAATTAAATATTTAGGGGAGAAGCTTGTCCGGTGTGTCTCTTTCGTTCGCTTCACGCATCCATCCATCCATCCTGGCTCAGTTTCCCTCTGTCTTTATCTCAGGCAATAAATCCTTCAACATGATGTCCCCCACTGGAGATAATTCTGAGCTTCTGGCCGAAATTAAAGCTGGGAAGAGTCTGAAGCCGACACCTCACAGTAAAGGCTACACGACCGTCTTCTCTAACAGCAGCACAGCGGGGAACAACGAGGAACGTCCAACATCGCCGCCGGAGCCTCTGCCAAAACCCCAACCCAATGACACCCAATCCGCAAAGCCAGAATCTCCACCGCCTATTTGTCCACCCACGCCACCCACTCCCACGACAAGCGGTGGGTCGCCCCAGAACCTGTCCACTTCTCAGAGCAGTGAGCAGCTTGCAACCACCATCAATGGAAATACTGCTGTAGTCCAGAGCAAATCCAGTATGGTGGATGTTGAGAGTCTGGTGCCCACACATGATGAGCAGGGCCGAGCCATCCCAGAGTGGAAGAGACAGGTGATGGTGAGGAAACTACAAGTGAAGATGCAGGAGGAGGAAGAGAACAAGAGAAAGTTTGCTGACAGTGGATACTATCAAGCTCAAGACTGGCATTATTCTCATGTGCACAATGCTATTCTGGGTCCATTTGGAGAACTAATGACAGAGGACGACCTTATCCGCATTGAGAAGCAGATTGAGAACCTCCAAGTCATGCACAAAGTGACAGAGGTGGAAAAAGACCTGGAACAGCTGGAGCAAGAGTTGAAGCAACTCTTACCTGTGTCTGCAGCTTTGAACCAAGACCACTTCTCTGTCAACCCCAAACAGGTTCATGGGCAAGCAGAAGACTTGCCTGCCTGGTGCAGCAAGATCTCCACGCTGCTCAAAAGCATGGCCATCTTGCTCGCCACTTTGGGTGGAAAGGAGATCGATATTCTGGAAATGATCACTCAAGGATATACGTACGAAGGTCTGAAGAATGGAAAGGGGCAAACAGGGATCTCAAATACAGTGGCCTCTGGAAACATTGGCCGATCACAATCATTCTCCACTCGAGAGGAAGTGGAGAAGGAGATTAAGCAGTGTGGTGTGTCAGTGAAGAACCTAAAAGCTAATTACGAAATTCATAGCCAGTCAAAGTATGAGGATGACAAAATGAACCGCATATACAAACGTACAAGGTCCTTGCCAGCAGTTAGTGAATGTAGCTACCCATCAGAGCCAATCTTGGAGGATGAGCTGCTGTTCTCTCTCAGTGAGAGCAACTCACAAGTCGGAGATGGGTCACCAATAGAGCAAGATCCAAATTTACCATTGGTGAATGAGGAACCTATAACACAGTCCCATGCAACTTTGGTGTACACTAAGCCTGAAAGAACAGGACCATCTGACTCAGAACACCATGACCACCCTGACAGCTCTATGAATCCACTATCCTCAGAGCAGCTCACCCGTAGTCTAGAGGTGCAGACAGACCTGAGCTATGTCCAGGAGTGCATCGAGATGCGAAAGGAGAGGATTGTGTTTCTGTTCCTGGAACACTGGAGAAAGTACACCATGACTGAATCCTACAAGTGCTCAGGAAGAGGGAAGACTCTAAGTGTTGAAGAGAACGACTGTCATTCCCTGTATTATCAGAACCTAGCTAAGCCAGATGGTACCATGCAAATGGAGGATGACCAACTGCTGTATTTCATGAAACAAAGACAGGTTGTGGGAAATCTTCTTGGCCACTGGAGGACCATTATGAGCCAGGTGCCCACGCGACAAATCCGGAGACTCAGTCGAGCTCAGATGATCTACTGGCCTGAGCACTTCCTTCCCCACATCAACGGGTCACCTGTTCAATATGAGAGTCTAACCCTTGACCTTTTCATGCTTGGCTACTTCCAGCTTCTTGAGATGAACATGTCCCGCACTGAGCGGAAGTTCCGCCACTTGCTTTGCTATGAAATGTTTGACAGACTTGGCAGTCACCCATGGGAAGTGATCCGCCAGTTCCACCGAGAGGTAATGGAGAGTATCGAGAAAGGGAAACGTGATTGGTCAGATGGATTTGAGGATATCAAGGTGAAGTATTTTGGTGACTCTGTGGAGGGTGGTGGGCTGCTGGAAGCTGCTGAGCTTATTCTCCCTCCAGAGGTTCTGCAGTCGTCCGTAAGCATATCACAAGCTGCTCCAGCTGACGCAAGTCTTTCAAGTATCTCACCACCAGACGTCCCCTTTGAACACCCAGGGCCAACTTCAGATGCAATGGCCACCCAACAGGGCTCTTCAGAAGACTCAGCGGAGAACATTACAAATGATACAGCAATACAGAAGAGTGGTACTGAAGTTCAACTACCACATGACAACATTGCAGCACAAGGTGCACCACAGTCAGAAAACACAGTAACACAAGCAACCATAACAGCTGAAAGCCCGCAGATGGAAGCCCCACACACTGTGAAAGAACAGGGCCGAGCAAATACCAAAGAGGAGCCCAATGAGGACTCCATCAAGCTTATTTATGAACTTAAAGAGTTTAGCAATGAGGAAATTATTAGATATATTGATCGAAGCTTCGCCTTCTGGAAAGAGAAGGAAGCTGAGATGTTTGACATCTGACTTATCAGGTCAAATTATTTGAAGGATGGAACACAATTATCAGGAGACAGAATAAA

Function

symbol description
espn Predicted to enable actin filament binding activity. Acts upstream of or within cell projection morphogenesis. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 36. Orthologous to human ESPN (espin).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_06735445_06742619.mRNA True 3210 mRNA 0.45 3 6735389 6743262

Neighbor

gene id symbol gene type direction distance location
CI01000050_06729717_06733879 NA coding downstream 969 6727996 ~ 6734420 (-)
CI01000050_06706062_06724379 NA coding downstream 10990 6706057 ~ 6724399 (-)
CI01000050_06666826_06671632 NA coding downstream 63498 6666714 ~ 6671891 (-)
CI01000050_06638872_06648965 KANK3 coding downstream 85817 6638872 ~ 6649572 (-)
CI01000050_06401583_06407303 PEX10 coding downstream 328066 6401391 ~ 6407323 (-)
CI01000050_06752838_06802179 ESPN coding upstream 9519 6752781 ~ 6802483 (-)
CI01000050_06949824_06962679 NA coding upstream 206085 6949347 ~ 6963646 (-)
CI01000050_07030874_07033872 NA coding upstream 287574 7030635 ~ 7033872 (-)
CI01000050_07037053_07037750 HER3 coding upstream 293330 7036592 ~ 7037814 (-)
CI01000050_07047887_07057166 TAS1R2.2 coding upstream 304290 7047552 ~ 7057414 (-)
G216510 NA non-coding downstream 18933 6716239 ~ 6716456 (-)
G216217 NA non-coding downstream 29478 6697924 ~ 6705911 (-)
G216501 NA non-coding downstream 69739 6661175 ~ 6665650 (-)
G216231 NA non-coding downstream 103262 6542461 ~ 6632127 (-)
G216458 NA non-coding downstream 240934 6493324 ~ 6494455 (-)
G216629 NA non-coding upstream 110195 6853457 ~ 6854580 (-)
G216624 NA non-coding upstream 177195 6920457 ~ 6921010 (-)
G216684 NA non-coding upstream 183514 6926776 ~ 6927077 (-)
G216686 NA non-coding upstream 185296 6928558 ~ 6928823 (-)
G216688 NA non-coding upstream 187718 6930980 ~ 6931315 (-)
G216408 NA other downstream 378878 6356017 ~ 6356511 (-)
G216093 NA other downstream 1183286 5489557 ~ 5552103 (-)
G215935 NA other downstream 1662280 5048916 ~ 5073109 (-)
CI01000050_04564233_04580815 KANSL3 other downstream 2122497 4563687 ~ 4581278 (-)
G214436 NA other downstream 3146332 3525816 ~ 3589057 (-)
G216931 NA other upstream 420833 7164095 ~ 7165401 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location