CI01000050_07047887_07057166 (TAS1R2.2)


Basic Information

Item Value
gene id CI01000050_07047887_07057166
gene name TAS1R2.2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 7047552 ~ 7057414 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_07047887_07057166.mRNA
ATATCACTTTTCAAATATAATAACTGTATAGTCTTGTATAACTGGTGAGCTTGTGGTGCTTGGACCCTGATATATTTTTATTCTAGTTTTATTTTAAACCTATTTCACAAGGAGACTATTTACAACTATTAACAATTTGTATTATTGAGCAAATTAAAAAAAAAATGGCAATAGATAGACATAACAATAAAACTTTATAATCTCTGCTATCATCCTGGTTAGCAACTCCCAGTTTTTTTAATAACATTATGGCTCGATCACAGGGTAACACGTCTTTTGTGTCAAATTGTCCTGACCTTCCTGATTCCATTTTCCCAACTGGCAAAGTGGTGAAGCCATCAGGTTGGGGGTCAAGTAGGTACAGAAGGTGCTGTATTTCTTGCTTAGAATCTGAGTTCAGCTTGAAAGGAGATTACTTATTGGGTGGCCTTTTTGCTTTACATGAAGTTCAACATGCAACACCTCTGTTCTCCCCAGAAGCCATTGAATGTTCCAGATACAGTTTCTCAAAATCTGGCTATCAGATGTTCCAAGTGATGAGGTTTGCTGTTGAGGAAATTAATAACTCCACCACTCTTCTGCCCAATGTTTCTCTGGGCTATGAAATTTTTGACCATTGTTCTGACACAAAGAATTTCGCTTCAGTCTTCAGTTTTATCTCAAAAAATGGATCGATAAAACCCAAAGAAAAACTCAACAACTATCAGCCTAAAGTGATTGCTTTAACAGGGCCATATGGAAGCACAAGAACTATTACTATTGCTCCACTGATCACAATGGACCTTATACCAATGGTGAATTATGGAGCTACCAGCTTTGCATTAAGTAATAAACTTCAGTACCCCTCTTTTCTAAGAACAGTGCCAAGCAACAAAGACCTGATAGAAATGATTATTCGCATTATACAGTGGTTTGGATGGAACTGGGTTGCCTTTCTTGGTAGCCAAGATGATTACAGTGAAGATGGCCTAAGACTATTTAGCAAGTATATACAAAATACTGGAATTTGTTTGGCCTATCAAGAGGCTCTAAGTCAAAGGGCAAACTACACTCTAACACTTAAAAAGATTGATATGCTTAACATCAATGTCATTGTTGTTTTTGCTGTGCCACAATATGCAAGCAGCATTATCAAAGCAGCCATAGCTAACAACATCCAAAACAAAGTATGGATTGCAAGTGAAACATGGGCTATGAATCAACAGCTTCCAAGAGAGCCAGGAATTGGGAAAATTGGAACAGTTATTGGTATTACAGAAAGATTGTTGTCTTTGCCCGGATTTGATGAATTCATCTATAAAGAGAGGGGAACAACTGATGTTAACCATAATGATAGTGCTGATAGTGAAGTCAAGAGTAATAGTAAGACATGTAATCAAGATTGTGATTGCTGCACATTGTTGACCGCAGAGGAGATTATAAATGAAAATCCCACATTCTCCTATGCCATCTATGCTGCCATATATACCATAGCTCATGCATTACATAAGGCTCTGCAGTGCGACATGAATGAATGCTGCAAAAACGCAACAGTTAAGCCATACATGCTTCTAGGACAAATCAAGAAGTTGGACTTCCCACTTAACGGCCGTCAGGTGAAATATGATGATAATGGTGATCCAACTGTCAGTTTTTCAGTCATACGCTGGCATACTGAAACAAATCCTCCACGATTCGATATGGTGGGCAGATATGATACATATCCAGAAATTACTTTTACTATCAACAACTCTCTCTTGTCCTGGCATAACAATGGTTCTGTTCCTTTCTCAAACTGTTCTGTTGAGTGCAAAGAAGGATTTTCGAGGGAACCTGATGGATTTCATAGCTGCTGTTTTCTGTGTAAAAAATGTCCACGTAACAGCTATGTGGATTATTCTCGGGATCCCTATGCCTGTTTTCCATGTGCAGAGAGTGAATGGTCTGATGAGGGCAGCGCGAAATGTAAGGCACGTTCTGTTGTTTATCTTCAGTTCACAGAAATCTCCTCCATCGCTGTGATGATTTCTGCCACATGCCTAATTATTCTCCTTTTTGCCATATTTGGCCTTTACACATATAACTACAACACACCAGTAGTTAGGTCTGCTGGTGGTAGCATGTGTTTCCTGATGTTAACATGTTTGATAATGTCTAGCATAAGTGTGTTCTTTTTCTTTGGACAACCCACATCTGTACATTGCCTCCTGAGAAATGTCATATTTGCATTTTTCTTCATTGTTTTTCTCTCCTGTATGGCTGTCCGTTCTTTTCAAATTGTGTGTATCTTCAAAATGGCTGCCAAGTTCCCCAGTGTTCACAGCCTTTGGGTAAAGTACAATGGACAGTGGCTCTTTGTTGGATTTTTTTCTGTCATTCATTTAATTTCTTGTGTGCTGTGGATGACTGTCTCGGCTCCCAAAGCTTTCAGGGACTCGTTAACTTTTAAAGACCAGATTATACTTAGCTGTGAAATGGGGAACACTGTAACTATTAGCATTGTTGTGTCCATGGGTTGGTTTCTTGGTTTCCTGTGTCTCTTATTTTCTTACATGGGAAGAGATCTGCCAAAAAATTACAATGAGGCCAAATCAATAACTTTCAGTCTTATTCTGCACAATGTGAGTTGGATTGTATACTTCACAGCATACCTCATTCTCAAAAGCCAATACATTCAGCTTCTTAATGCAATGACACAGCTAGCTAGTATATACGGAATTCTCTTCAGCTATTTCATACCAAAATCTTACATTATGATATTCCAACCACAAAAGAACACTCCTGCATACTTTCAAACATCTATTCAGAATTACACCCAGACCATTAGTAGGACTTAGACCACAACAAAGCACACAGTAAACACAAATGCTTCCTTTTAATTAGCTTTCCTTTTAAGAAATTTTCTGTAAAATGCTTTTATACTCATTTCCATACTGTGTCTTTAGATCCACTATTAATTCCCAATCAGATATCATTTGTTTGTTGTTATATCTGCTTGTTGTGGTGTTGTATTTGAGTTTTGTTAAGAAAAAGCTATCCCCTTTTGTTTTAAAACACTTTAACAAGGCAGTGACTGGTGTGCTGGTAGACATTTTAACTTCATCATGCCAACATAAGCCTAAATGGTAAGACAGGCCGTCCTAATCACACTGCAATTTAACAGGTGAATAAA

Function

symbol description
tas1r2.2 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Is expressed in gill raker; mouth; and pharynx. Orthologous to human TAS1R2 (taste 1 receptor member 2).

NR:

description
taste receptor type 1 member 2b

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_07047887_07057166.mRNA True 3151 mRNA 0.38 7 7047552 7057414

Neighbor

gene id symbol gene type direction distance location
CI01000050_07037053_07037750 HER3 coding downstream 9738 7036592 ~ 7037814 (-)
CI01000050_07030874_07033872 NA coding downstream 13680 7030635 ~ 7033872 (-)
CI01000050_06949824_06962679 NA coding downstream 83906 6949347 ~ 6963646 (-)
CI01000050_06752838_06802179 ESPN coding downstream 245069 6752781 ~ 6802483 (-)
CI01000050_06735445_06742619 ESPN coding downstream 304290 6735389 ~ 6743262 (-)
CI01000050_07155856_07157697 NA coding upstream 97657 7154965 ~ 7157697 (-)
CI01000050_07207399_07217984 OGG1 coding upstream 149761 7207175 ~ 7217984 (-)
CI01000050_07239689_07244721 NA coding upstream 182201 7239615 ~ 7244721 (-)
CI01000050_07307744_07309403 NA coding upstream 249997 7307411 ~ 7310537 (-)
CI01000050_07338022_07340567 ANGPTL7 coding upstream 280031 7337445 ~ 7341011 (-)
G216688 NA non-coding downstream 116237 6930980 ~ 6931315 (-)
G216686 NA non-coding downstream 118729 6928558 ~ 6928823 (-)
G216684 NA non-coding downstream 120475 6926776 ~ 6927077 (-)
G216624 NA non-coding downstream 126542 6920457 ~ 6921010 (-)
G216783 NA non-coding upstream 10984 7068398 ~ 7068730 (-)
G216785 NA non-coding upstream 18552 7075966 ~ 7076189 (-)
G216787 NA non-coding upstream 19921 7077335 ~ 7077568 (-)
G216788 NA non-coding upstream 20672 7078086 ~ 7078321 (-)
G216790 NA non-coding upstream 23059 7080473 ~ 7080716 (-)
G216408 NA other downstream 691041 6356017 ~ 6356511 (-)
G216093 NA other downstream 1495449 5489557 ~ 5552103 (-)
G215935 NA other downstream 1974443 5048916 ~ 5073109 (-)
CI01000050_04564233_04580815 KANSL3 other downstream 2434660 4563687 ~ 4581278 (-)
G214436 NA other downstream 3458495 3525816 ~ 3589057 (-)
G216931 NA other upstream 106681 7164095 ~ 7165401 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_035968 tas1r2.2 coding NC_007119.7 CM002892.2 46610020 ~ 46619620 (+)