CI01000052_00430871_00437100


Basic Information

Item Value
gene id CI01000052_00430871_00437100
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000052
NCBI id null
chromosome length 3494004
location 429733 ~ 437122 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000052_00430871_00437100.mRNA
TGATAAATAAGCAATTATTTATCACCATTTTACCAGAGCCATTAGGTGGCTTCCATAAGAAGCATTCCCATACAATTCTCTTCCATTCTACATTCAGTTCAACAGCACTGCATTTATCCATTCTGTGTTCACTTCATTTATTTGTTTCTTTGATTTAATTCAGTATTTTCCTTTGATTATTATTTTACTATCTTTTAGAAGTGCATATTCATTATTTCATTATTAATCGTTGTGGTATTTACTCTTGCATGTCTATTGTTAATAAATTTCATTGATTTTATTATAACTGTGTCTTCCTTGTGTTGATGATCAAAGACTCTACTAGTTGACCAGACTCTCGCAAATCCTTCAGATAAATCAGTTGACCGACTCCCTCCAGTTTATGTTAATTCTGAATTATTGAACAGCTCTTTTGGAGTGTTCTTAAATTGTTACTGGTGCCCTGGTGCCCCATATTACAAAAGGGGGGAGGGGTCATCTGATACACTCATAACCACACCTTAAGTGACACGTGATCAAAAATCACTACGTCACCGGTGAATGGAGTAAAAATCACTACATTTTGGTGCCCCGTGTGAGGCCAGCTAAGATTGAAATGAGTCTTTGGTTCATCAACACAACAAATTCTCCGAAAAGGTTGCAAGAGTAATATTTTAACGGGAAGCTAAAATTCTCAGTTTGGTCAGTTACCGTTTGCTTAGCAGGTGGTCCCTCCCAAGCCTGATTCATAGTTTCCTCACTCAGCTCTGTGGTGCTGTTTATGAATAGGATTTGTTGCAGTTGAATTGTTTGCAGTAAATAGAATTGTTGTTTGAGCTTTGGACCATTGTACAGTGGCATAGTTCTGGTAAAGCGTTTCCTCATTCAGGAAACTATAGTGTTAGCAGAGGTTGTAATCATTAATTATAACTAATTGCTACTACTAAGCATAGCAAAGGCTCATATACCTTGTAAGTCTATCAAAAAGTTCTGTGTGAACTTAGATAAGTGTCAGATAAGGGCAGTTCCCTCTGACCACTCATAGCCAAGGGCTAAAAACCTCATCACTAGTCAGTGTGAGACTATCAACACTATCAACACATTTGTGTTAAGTACTGAGATTAGCTAGTTGCTAGGTGCAGTACAGTATCGGTCAAAAATGGCAAAGTTAACCCTACCTGAACAGCTGGTGGTAGACCTGACCAGTGCTGTGAATCCAGGTTACATAGAGATGATTAAGGGTTTAAATTATGATGAAATCAGCCTCAAAACAACACAGCTAACAGCTGAAGCAGCAGGCCAGGCCTTAAAGGGTGCCTCACTAATCAAACTCCTCTCTAGCTTAGCACTAAATTGGGCTGCTCAGTTAACCCAAGCAATAGACAGAGTGTCCCTTGCTAATGAACAGATAAAAGATATGACGATCCAACAGCTAAAGAGTGAGCTGGCTGATCTGCGTCATGCAAATGACCATTTGAAGGTTGAAGCCAATAGGTTGTCTGCAGAGAAAGAAGACTTGCGGTATATCACAGACAGCCAAGGAGCAGAAATCAATAGGCTAAAAGATGAAAATCTAGACCTAGAAACTGAGCTTAAACAGCTCAGGAATGAACGCTCAAGTTCAGTCACTATACTTAGAAGCCAGGATACAGCCGCTCTGCAAACAGAGCTGGCTCAGGCTCGAAATGATTTGTCAGCACAGGCAGACAGATTAAGGATAGTGAGTATCAGTGAGAAACAGGCCAAAGATGACTTAAGGTCAGCCTTGTCTGAAATTTCTAGTTTGAAAATGGACTTAGAAATGGAACACAAACTGTGTATTGATGCCCGTGAGCAGTCAGAGTTGTTTAAGCGACAACTGGACGATTCAAAACAGGCTCAGGTTCAACTTAGGGAGGACTTGGCTAGGGCAGACAATAAATTATTGGAAGTACAAAACAGTCATGACAAAATTGCTTCCAGAGCCCGAGAGTGGGCAGATAAAGCTGATATGGCAGAGCAGAGGCTAGAGGAAATAGGGAAGAGAATGGAGCAGTTAGACATAAATATGGACACACCCCATGAACCTGAACCACCAAGTGTGCGCTTCAGCTCATTTGGCCCACAAGTGAAAGACTCCCTAATGGATAGCCCCTCACAGAGACAGCGCTATCAGACCCATGGTGATGTTGTAGCTGCCAGGGGCCCAAACCCCACTGCTAGCCCCAGTCATCCTTATGGAGTAGATTCTGATTCACCTGTGTGGGGAAAAACTAGTCGCTCCATCCCGGATTTCCCTAGTATAGCGCAGTCCAGAGACAGTAGGCTGCGTCAGCTTAGGGAATTAGCACGTGACATTGAAGTGATTAATCCTGACACCCCTGGAAGCAACATAGAGTTGTACCTTAAGGATGTAAACTATGCATTGTCATACATCCCTGAGGCCACTATGGCAGATAAGCTACTCCTTCTGAGGCTTTCTGCCTTGCAGACCAAGCAAAATCGCTACGAATCACCCAGAGAATATTATGAACGCTTACGCAGAGTGTATTTTGCTGGTGCTGATTCTCCTAGGGCAGAAGAGGATGTGATGTTTAAAAGTCTGTTTGTGAGTAATTTGCATCCAACAATTAGGAAGTCTCTTTCACTGCTGGTAGATGTTGATCACATGACTGCAGCAGAGTTAAGACAGCTGGCAATGCGAGCCTGGGAGAGTGAGAAGTTACACACAGATAAGAAGGACAGGGACCCAGGCACTCATGTGTTTGAACTCCAACATGACAGGGAACCTCCCCTTGAACTAGAAGGTTCAGAGCTTCCCCAAAGTGGACCAGCTCGTCCTAGTCGCCCCTCGCCGCCAAAGTCTGGGTGGGGGGAAGAACCGGGGGAAGGGGGAACCATGCAACAGATTGTAAGGCCTAACCAATCAGATGTCCGTAGACCAAATCCCAGTCTCTGTCAGGTCCTTGGTGACTTGACACAGAGAGGTAGGGCCAGAAGGATTTACATTTCTGTGTCCATTGAAGGTGTATTAACATGTGACACACTGCTAGATACTGGCTCAGAAATTTCTTTGGTGTCACCTGGGTTGTTTAAAAAACTCACCCAGGTAACCAACTCACTTGGTAAGTGGCTCAAGATTGAGAGTTGTCAGATCAAGATAACTAGCTACATACAGGATCAGGCCCCGATTAACCAGCGGGTGTGGGTGCAGTTAACCTTTGGTGAGATGAAGATAGTTCACCCTCTCTATGTTGTTGGTTTTGACACAGAACAACTTCTTATTGGCCAGGATTTGTTGAATAGGCTCACACCATTAATTGACTATCACAGCTGTCAATTGTGGGCACAAGTTAGAATCCCACGACCCATTGAGGAGACTAGTTCTGGTCAGAAGCTATGCAAGGCAGTGGAGGTAGAGAGGACATGTGACTCTAGACAGCTGACAGTGAAGGATGTCCACCTTAATGAAGAGGCACCCGCTGTGAAGGAAATGCAAATCATCAGCCCCCAGTCAGCAGACATGGCTCATGAGAACAAGATCCCTCTAGAGCTGTTAGAGAAGAAACATGCATTTCTGTGTGCCCTGGAACCTCTTAACACCCAGCTTGGCCATAAAAATTTCAAGCACTACATGCTTGTGCTACCTGACCTGACACACTCAGTATACATTGGTTCTGATGTGTTAGTGAGACTAGGGGTGCAGGTAGACACAGTCAACAATGTGTTTTGGTCCAGAGCAGATATTGGCCCTAACATATTGTCTTGTGACGCTAATAACATGCTTTCTGGCCAGACAGTTCCCCAAGCATGTCAGGTTATGAATGAGTTTGACACAGTAGTCCCTGCCCAAACTGCAGAAGTCCCGGTCAGACTAGTCATAAAAAGGGGTCAAGAAATGAACCAGACAGTACTAGCCTTTTTCCAGCCCTCTGCTCAGTTTTGCAGTTTGGGACTTACAATCTGTGGTAACCCACAGCTTGAATTGTACAACCGCTCAACTTACCTACTTGTACAAAATTTCACTAGAGGAAGTATTCGCATTCCTTCACACACTCCTCTAGGATACCTGATTGATAGCTCCTTTCATGATTTTGAATTAACTATTCCTGTCATAGGAGAGCTTCCTGACTTGCCTATAGAGAGAGACAACTGTGAGCAAGTGTATCTCACCTACCCTACCAAGATGATTTCCATCATAACCCTCCCAGGTGTGTTTGAGGAAGCCATCTGTAGAATAGACTTTGAAAGTGACAGTGAGATAGTTGTACATACTGTGATTTCCCAAGAGTCGCATGCACCAGTGAACTGTGAGAAAGATGCAGGAAATTGCGCCGAACCATACCCTGGTTTTGAGTCAGAAGTACAACAGCAGTTAGACCAAGCAGACGCTCTTGATACAGAGATTCAGCGTCAGGAATTAAGACAGGTGTTTTATGAGCACAAGGAAATCTTTTCTAAGGATTCCTATGATTGTGCAGTTACAGATGTCCATACTGTCCGTATTCCCACAGACCCAAACGCACCGCCTACCTTTGTGCGGCAATACAGAACTCCACTCACTGCTTTTGACTCCATCCAGGAAATTATTGATTCCCAGTTAGAGAAAAAGATCATACGTAAGTGCAATTCCACCTACAATTCTCCAGTTTGGCCTGTCTTAAAGCCAAGTGGAAAGTGGCGTTTAACTGTAGATTACCGGCAGCTCAACAAACAGGTTCCCCTGTCACGTTGGCCTATGATACATCTTGACCAAGAGTTAGCAAAGGTTACTACAGCTAAATATTTCTCCACAGTCGACGTTGCAAATGGATTCTGGACAATGAAGGTAGACCCAGCAGATCAGTATAAGCTAGCATTTTCTTTTGGAGGTAGACAGTTCACCTGGAACAGGTGCCCATTTGGCTATTCAAACTCTCCTGCAGAGTTTAATATATTTCTACACAAGGCAATGGGTGATGCAGCTACACGTGGTAACTTGATCTATGTGGATGATATCCTTATGCGTAGTCAGACCTGGTCAGACCATCTAACCGAGATACGACATGTTCTCACCCAGCTCACTGAGGCAGGTGCTAAATTGTCATTATCCAAAGGACAGTGGTGTAGAACAAAAGTGGAGTATGTAGGACTGACTGTTGGTCCTGAAGGTATTCAACCTCAGTCTAGTAGAATAGAAGCAGTAAAGAATATTAAACCTCCCACAAATGTTTCTGAACTGCATAGCTTCCTGGGAGTATGCAATTATTCCCGTCAGTTTATAGAAGACTATGCAGACATTGCCAGACCACTGCATGAACTGCTACAGAAAGGTTATGAGGTGGAGGTGAGATATGCACAGAACAATAAAATGGCACTAAGCCGTGGACTAGCTATGTGCCAGCATTGCGTTGATGGAGAATACGCACAAGAAGCCAACACAGTAATCACCACACCCTCACTGACATCAAGCCATCATTACTATGATGAAAATGTCTGTGCAGGCCTTCCTAAGGCCTACATTGATGGGTGCTCCTATCACCATGAACAACACATACAGGCTGGAGTAGGATTAGTCTGGGAGACTGACACCCCCTGTGGTGCACAACAGTTCTGTTTAGGCCCTAAATCTAGTCAGTATGCAGAAATCGCCGCCACACTCATAACTCTGCAACAAGCAGCAAAGTATGGGATCAGAGATTTGGTAATCTGTTCTGATTCAAACTATGCCAGACACAGTTTTGTCTCTCACCTCCCTCATTGGAAACAGAATAGTATGAAAAATGCCAGAGGAAAGGAAGTTAAGCATAAGGAACTGTTTCTTGCCTGTGACAAACTTGTATATCAGAATGGTATGACTGTGTACTGGAAGAAGGTAAAAGGGCATTCACAAGCCCCTGGGCCAGACAAAACAGGCAATGATGAAGCTGAAGCTGAAGGCAGGAATAACATTTCCCTGGTCCAACATTCAGATGGATTGGATCGGTCCTGTAAAGTCCTCCAGAGCTGGTGGGGGCTACCCCTCTCTGTAGATTCAGATCGAGGTACTCATTTTACAGCCACTGTTATGACGGAACTGTGGAAAATGTTGGGAGTTCAGGCAAGACTTCACATTTCCTACCATCCTCGCGCATCGGGACAGGTAGAGAGGTCGAACTGCCATATTGTAGGGATGTTGAGGAAGTACATTTCAGCTAATGGAAAAGACTGGGATGTAAAACTACCCCTGGTCTTAATGGCAATTAGGTCCACACCTCAAGTGGGTCCACTTCAACCAGATTAAGCCTTACAAACCCCAGATGGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000052_00430871_00437100.mRNA True 6242 mRNA 0.44 6 429733 437122

Neighbor

gene id symbol gene type direction distance location
CI01000052_00294399_00296217 NA coding upstream 132927 294130 ~ 296806 (+)
CI01000052_00165058_00166912 NA coding upstream 262798 165058 ~ 166935 (+)
CI01000052_00061936_00072645 NA coding upstream 357067 60529 ~ 72666 (+)
CI01000052_00045445_00045867 NA coding upstream 383738 45170 ~ 45995 (+)
CI01000052_00437783_00438718 NA coding downstream 156 437278 ~ 438749 (+)
CI01000052_00496215_00499293 NA coding downstream 59093 496215 ~ 499724 (+)
CI01000052_00702155_00711896 SLC16A1, MCT1A, SLC16A1A, SLC16A1B coding downstream 265033 702155 ~ 711896 (+)
CI01000052_00714377_00725358 ZYMND12 coding downstream 277255 714377 ~ 725389 (+)
CI01000052_00793472_00831585 KAZNA coding downstream 356350 793472 ~ 831953 (+)
G223038 NA non-coding upstream 2536 426978 ~ 427197 (+)
G223037 NA non-coding upstream 3022 426188 ~ 426711 (+)
G223035 NA non-coding upstream 4862 424582 ~ 424871 (+)
G223034 NA non-coding upstream 6323 423131 ~ 423410 (+)
G223032 NA non-coding upstream 8051 421359 ~ 421682 (+)
G223222 NA non-coding downstream 26627 463749 ~ 463993 (+)
G223226 NA non-coding downstream 34388 471510 ~ 471729 (+)
G223244 NA non-coding downstream 74715 511837 ~ 512381 (+)
G223264 NA non-coding downstream 95866 532988 ~ 533300 (+)
G223274 NA non-coding downstream 112335 549457 ~ 549784 (+)
G223545 NA other downstream 833370 1270492 ~ 1270927 (+)
G223694 NA other downstream 1612204 2049326 ~ 2104299 (+)
G224953 NA other downstream 2994014 3431136 ~ 3460136 (+)

Expression


Co-expression Network