G223226


Basic Information

Item Value
gene id G223226
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000052
NCBI id null
chromosome length 3494004
location 471510 ~ 471729 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU253216
CTTCAGTTTAACTGTTATTTCTTGCTTGTAGCATAGCAAACTTCTTTTCCAATAGCAGCTTTTACTGTTTAACACTCAAAATTATGAGCTTTGAGATTTAAAGTTGCTTCCCCAACACTGATTGTGTGTTTGAGTGTGTATGACGGTCACATTGTCACACAGCTCACTGACCGATAGTGCTGTCATGTTTTTATGATTTCTGTCACCCCTGACCTTGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253216 True 220 lncRNA 0.38 1 471510 471729

Neighbor

gene id symbol gene type direction distance location
CI01000052_00437783_00438718 NA coding upstream 32761 437278 ~ 438749 (+)
CI01000052_00430871_00437100 NA coding upstream 34388 429733 ~ 437122 (+)
CI01000052_00294399_00296217 NA coding upstream 174704 294130 ~ 296806 (+)
CI01000052_00165058_00166912 NA coding upstream 304575 165058 ~ 166935 (+)
CI01000052_00061936_00072645 NA coding upstream 398844 60529 ~ 72666 (+)
CI01000052_00496215_00499293 NA coding downstream 24486 496215 ~ 499724 (+)
CI01000052_00702155_00711896 SLC16A1, MCT1A, SLC16A1A, SLC16A1B coding downstream 230426 702155 ~ 711896 (+)
CI01000052_00714377_00725358 ZYMND12 coding downstream 242648 714377 ~ 725389 (+)
CI01000052_00793472_00831585 KAZNA coding downstream 321743 793472 ~ 831953 (+)
CI01000052_00836931_00841228 TMEM51A coding downstream 363639 835368 ~ 841433 (+)
G223222 NA non-coding upstream 7517 463749 ~ 463993 (+)
G223038 NA non-coding upstream 44313 426978 ~ 427197 (+)
G223037 NA non-coding upstream 44799 426188 ~ 426711 (+)
G223035 NA non-coding upstream 46639 424582 ~ 424871 (+)
G223034 NA non-coding upstream 48100 423131 ~ 423410 (+)
G223244 NA non-coding downstream 40108 511837 ~ 512381 (+)
G223264 NA non-coding downstream 61259 532988 ~ 533300 (+)
G223274 NA non-coding downstream 77728 549457 ~ 549784 (+)
G223298 NA non-coding downstream 109171 580900 ~ 581171 (+)
G223304 NA non-coding downstream 124740 596469 ~ 596681 (+)
G223545 NA other downstream 798763 1270492 ~ 1270927 (+)
G223694 NA other downstream 1577597 2049326 ~ 2104299 (+)
G224953 NA other downstream 2959407 3431136 ~ 3460136 (+)

Expression


Co-expression Network