G223304


Basic Information

Item Value
gene id G223304
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000052
NCBI id null
chromosome length 3494004
location 596469 ~ 596681 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU253306
ATTTCAGTAAGTTGTACTGTATATTTTATCATACCTTCAGATGTTTAGTCATGTTTATTTCGCGCTGTAACTGGTATTAAAGCGGAGAGGATGTTCACATGCGCTCCGTGCTGCCGCTTCTCTTTAACTGAGGCGCTAAAGCGATCTGTCACGTCACATTAAACAGCGCCAAAACGGTATTTATTTTTTGAATCTCATAATAAGATGGACGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253306 True 213 lncRNA 0.40 1 596469 596681

Neighbor

gene id symbol gene type direction distance location
CI01000052_00496215_00499293 NA coding upstream 96745 496215 ~ 499724 (+)
CI01000052_00437783_00438718 NA coding upstream 157720 437278 ~ 438749 (+)
CI01000052_00430871_00437100 NA coding upstream 159347 429733 ~ 437122 (+)
CI01000052_00294399_00296217 NA coding upstream 299663 294130 ~ 296806 (+)
CI01000052_00165058_00166912 NA coding upstream 429534 165058 ~ 166935 (+)
CI01000052_00702155_00711896 SLC16A1, MCT1A, SLC16A1A, SLC16A1B coding downstream 105474 702155 ~ 711896 (+)
CI01000052_00714377_00725358 ZYMND12 coding downstream 117696 714377 ~ 725389 (+)
CI01000052_00793472_00831585 KAZNA coding downstream 196791 793472 ~ 831953 (+)
CI01000052_00836931_00841228 TMEM51A coding downstream 238687 835368 ~ 841433 (+)
CI01000052_00906265_00916799 SEMA3B coding downstream 307875 904556 ~ 916813 (+)
G223298 NA non-coding upstream 15298 580900 ~ 581171 (+)
G223274 NA non-coding upstream 46685 549457 ~ 549784 (+)
G223264 NA non-coding upstream 63169 532988 ~ 533300 (+)
G223244 NA non-coding upstream 84088 511837 ~ 512381 (+)
G223226 NA non-coding upstream 124740 471510 ~ 471729 (+)
G223352 NA non-coding downstream 85506 682187 ~ 682414 (+)
G223353 NA non-coding downstream 87157 683838 ~ 684093 (+)
G223355 NA non-coding downstream 87864 684545 ~ 684768 (+)
G223341 NA non-coding downstream 122016 718697 ~ 770512 (+)
G223342 NA non-coding downstream 138140 734821 ~ 736765 (+)
G223545 NA other downstream 673811 1270492 ~ 1270927 (+)
G223694 NA other downstream 1452645 2049326 ~ 2104299 (+)
G224953 NA other downstream 2834455 3431136 ~ 3460136 (+)

Expression


Co-expression Network