G223352


Basic Information

Item Value
gene id G223352
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000052
NCBI id null
chromosome length 3494004
location 682187 ~ 682414 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU253356
CTGGAAATGACTTTTAGATAAGCAGAAAGGATATTAGAACATGCTAATACAACATTAGCCATGCCAAATGAAATCAGAGAGCCATCCACCCCGTTGATGGTTATGACCGACAGTATCCACAGTTTAATCACATTATTCTGTTAAAGTACTGCTTCACTCATCTCAGCTGCTCATGTAAATATTTGGTTTGTGTGCAGAAAAACAGGCTTCTGTTTATCATAAATGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253356 True 228 lncRNA 0.38 1 682187 682414

Neighbor

gene id symbol gene type direction distance location
CI01000052_00496215_00499293 NA coding upstream 182463 496215 ~ 499724 (+)
CI01000052_00437783_00438718 NA coding upstream 243438 437278 ~ 438749 (+)
CI01000052_00430871_00437100 NA coding upstream 245065 429733 ~ 437122 (+)
CI01000052_00294399_00296217 NA coding upstream 385381 294130 ~ 296806 (+)
CI01000052_00165058_00166912 NA coding upstream 515252 165058 ~ 166935 (+)
CI01000052_00702155_00711896 SLC16A1, MCT1A, SLC16A1A, SLC16A1B coding downstream 19741 702155 ~ 711896 (+)
CI01000052_00714377_00725358 ZYMND12 coding downstream 31963 714377 ~ 725389 (+)
CI01000052_00793472_00831585 KAZNA coding downstream 111058 793472 ~ 831953 (+)
CI01000052_00836931_00841228 TMEM51A coding downstream 152954 835368 ~ 841433 (+)
CI01000052_00906265_00916799 SEMA3B coding downstream 222142 904556 ~ 916813 (+)
G223304 NA non-coding upstream 85506 596469 ~ 596681 (+)
G223298 NA non-coding upstream 101016 580900 ~ 581171 (+)
G223274 NA non-coding upstream 132403 549457 ~ 549784 (+)
G223264 NA non-coding upstream 148887 532988 ~ 533300 (+)
G223244 NA non-coding upstream 169806 511837 ~ 512381 (+)
G223353 NA non-coding downstream 1424 683838 ~ 684093 (+)
G223355 NA non-coding downstream 2131 684545 ~ 684768 (+)
G223341 NA non-coding downstream 36283 718697 ~ 770512 (+)
G223342 NA non-coding downstream 52407 734821 ~ 736765 (+)
G223376 NA non-coding downstream 93428 775842 ~ 776081 (+)
G223545 NA other downstream 588078 1270492 ~ 1270927 (+)
G223694 NA other downstream 1366912 2049326 ~ 2104299 (+)
G224953 NA other downstream 2748722 3431136 ~ 3460136 (+)

Expression


Co-expression Network