CI01000052_00165058_00166912


Basic Information

Item Value
gene id CI01000052_00165058_00166912
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000052
NCBI id null
chromosome length 3494004
location 165058 ~ 166935 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000052_00165058_00166912.mRNA
GTGCTTCATGGTGGACAAGGATATGTGTGAGATAAATGCCTTGCGGAAAGTCTTCCCAGAGTCAGATATCTTGCTGTGCTGGTATCATGTTATAAAGATGAAGCTTTGTGCAACACATCAAGATTTTAAGTCAACTGCTGAGCAATTCCTCAAGAGGTTTGAAGATTTCCCAGCTCTTTGCTCATACTTCAAGGATCACTGGCTGGAAATAGGACACACATGGTCTGACTTTGGACGGTGCTATAACCATGCCGACTCCAATACAAACAATCTTGTTGAAGGATTTTTCCATAGCCTAAAATATCAGTTTTTGGGTGGCATTAGGAACCGTAGACTGGATGATCTTATCAGCATTCTCATCAAGAAGACAGATGGATACTTCCATGTCATTCATGATTTGCAGGCAGTTGGAAGAATGAAAAATGCCTCTTTGAAGTCAGGAGAAATACTTAAGTCAGCCTCTAGATTGCTGGAAAAAGGTTGGCAAGATAGCATTAATCTTGTATCCCACGACACATACCTTTATGAAGTTCCATCAGAACAAACCCCTGGTCTATCCTACAAAGTTTGTCCATCTGAAAGTTTTTGTAGCTGCCCAATAGGAATCAGAGGACATCGCTGTAAACAAATTGTACTTACTGATTTGCTGAGTGAACATGATTCTCAGAAGTTTCCTGCTTTGAATTATCAAATAAACGCACATGCTAGTGTAATTAAGCAAAAGAAGCTTTACTCCATTCTATGCTTTGACACAAAAGAGGTAGATGTAAAAAGTTTATGTAATGAGAGGATTTACCCCACTTCTGCAACAACATTTCAGTGTACCTGTTGTACATTCTCTTACAATGAGAAATGTGCTTGCCTTCTATTGGCATGTGAATTATTTGATGTCATATTAACAAGAGATGTACCTACTTTGTGGCAAGAAGACATGTCAATGCAGTTAAATGTGAACAATGAAGCATACCACTCTAAAACTGAAGTGCGGAAGTTAAATGAAATACTGGAGACTGTGCAGAAATGGCAGAACATTCCTCAGCACATTAGCCAGCAAATTAAAAACCTGCATGACAGTGTAACAAATGTCAGCATGACTGGAACGGCATTTACAGCTGTAACTACAGATTTGACAAGAAAGATAAGACCACTGTTTCCACACAGAGCAAAAAACATGAAACGAAAGTATAGAAAGAATTTCAAAAGTCGACTAACTAAATTCTAAGAATGAATGTAGATATGAAAAAA

Function

NR:

description
Si:dkey-106c17.2 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000052_00165058_00166912.mRNA True 1245 mRNA 0.38 4 165058 166935

Neighbor

gene id symbol gene type direction distance location
CI01000052_00061936_00072645 NA coding upstream 92392 60529 ~ 72666 (+)
CI01000052_00045445_00045867 NA coding upstream 119063 45170 ~ 45995 (+)
CI01000052_00294399_00296217 NA coding downstream 127195 294130 ~ 296806 (+)
CI01000052_00430871_00437100 NA coding downstream 262798 429733 ~ 437122 (+)
CI01000052_00437783_00438718 NA coding downstream 270343 437278 ~ 438749 (+)
CI01000052_00496215_00499293 NA coding downstream 329280 496215 ~ 499724 (+)
CI01000052_00702155_00711896 SLC16A1, MCT1A, SLC16A1A, SLC16A1B coding downstream 535220 702155 ~ 711896 (+)
G222878 NA non-coding upstream 11656 153017 ~ 153402 (+)
G222870 NA non-coding upstream 35287 129515 ~ 129771 (+)
G222869 NA non-coding upstream 36902 127901 ~ 128156 (+)
G222866 NA non-coding upstream 45690 119004 ~ 119368 (+)
G222853 NA non-coding upstream 57362 93871 ~ 107696 (+)
G222882 NA non-coding downstream 10304 177239 ~ 182165 (+)
G222906 NA non-coding downstream 79667 246602 ~ 328614 (+)
G222964 NA non-coding downstream 166193 333128 ~ 333361 (+)
G222977 NA non-coding downstream 177604 344539 ~ 344755 (+)
G222982 NA non-coding downstream 182592 349527 ~ 349820 (+)
G223545 NA other downstream 1103557 1270492 ~ 1270927 (+)
G223694 NA other downstream 1882391 2049326 ~ 2104299 (+)
G224953 NA other downstream 3264201 3431136 ~ 3460136 (+)

Expression


Co-expression Network