CI01000052_00061936_00072645


Basic Information

Item Value
gene id CI01000052_00061936_00072645
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000052
NCBI id null
chromosome length 3494004
location 60529 ~ 72666 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000052_00061936_00072645.mRNA
GCATTAATGGCATGACCCGGTCAATCTTCTGTCTCATATCTCGTACGTGCTCTATCACTGTTTGGTGTGGGGAGGGCTGGCGTTCCCATGCATCCCAGGCTATGTTGAGGAGTCCTCGTGGTTGCCGCCCAAACAACAACTCAAAGGGTGTAAATCCTGCGAAGGCTTGAGGAACTTCACGGATACCAAAAAGCATGTACGGGATCATGAGGTCCCAGTCCCGTCTGTCCTCAGCTTCCACCCGCCGTAACATCTGCTTTAGAGTTTGGTTGAAATGCTCAACTAGTCCATCCGTTTGGGGGTGGTAGACTGAAGTACGGAGCTGTTTGAATTGCAGCAACTGGCACAGGTCTGCCATGAGCTTGTACATAAACGGGGTGCCCTGGTCAGGATCTCGGCAGGAATGCCAACCCAGCTGAACAGAAGAAACAGTTCCTTGCCAATGGTTTTCGATGTAGCCTTCCGATGGGGTACTGCGTCTGGATATCGGGTCACATAATCCACAATGACAAGTATGTGCTTGTGGCCTCGGGCAGATTTCGGCAGCGGTCCCACCAAGTCCATCCCGATGCGCTCAAAAGACACCTCAATACTAGATAATGGGATAAGTGGGCTGGGGGGAGATTGTTGTGCTGATGTTCTTTGACAAGTTGGGCAGCTTTGGCAGAACCATCCAGGCCAGGCCAATGGAACCGATCTCGAATGCGCTGAATTGTGTTCTTCACCCCCAGGTGCCCTGCCATCGGGTGTGAGTGGGCCAGCTCCAACATGATTTTAGTCATGGACTTCGGCACTACCAACAGGTGTTTCTCCTCCCCCCACCATTGGGCGACCCAGTAAAGCAGGCCATTTTTCACTATGAAGTGTGGGTAGGGATGTGGTGCTGGATGTCGAGCTTCTCCCTCCACCTCCCTGACCTGTGACCAACAATTCCGTAGCCTATTGTCCTCTCGCTGTTCCTGTCCAAACAAGCCCCCTTCAGTGATCTGTTGGAGGAAATCAGCATACAAGTTAGGGGGCGAGTTTTGTGACTCACCATCTCTCTTGCTCTCGGTGGCCTGCAGGACTGGTTGGCTAGCATTCCGATGGTGGGTCTTTTGTTTTCAGTGGCTCCCGTTCCGACTAGCAGGTTGTATGGTGGCTGCTAACAGGTGGTCAAACCCTGGCCAATCCCTTCCAAGCAGCATGGGTACAGGGAGGTCCTTTGCCACTCCTACTTCCACTGACTAGGACTTCGATCCAGCAGAAATGGTGACAGTTTGGGCAGGCACATAACGAGTGTCCCCATGTACGCAGGTGATGGGGATAGATGACTTGCTGTCTTGCCAGGGCTTGATGATTTGAGGTTGTACCAAGCTCACTGAGCGGCCCGAATCCAGAATTGGTTTCACCAGCATTCATTCCGACATGCACTTGCCATTTGGGCGCCTCCAGTGGTATAGCTCATGGACAATGCAGCCTGCTAGCCATACCTTGGTCTTGGGTGGGTTTGGGTCCGTGGGCATGGGTTCATCCCGTGGTCCCGAAGCTGCCGGCCTGCTTATTGGTCTTGAGATGCCCTCCAGTGATGACTCCAGAGTCCCGAGCTTGGGCTGCCTCCACGAGCTCCACTGCCTCTATGAGCTACCTGGCCAGCTGTGGGATTCCCAGAGAGAAGCCAAAGTTGAGCTAATTTTGATAGCTGGGCGGCTTGAACTCGTGCTGGTGCCTGCAAGTCATACATCCATTCATGGAAATGTTGGGCAGCACACACCAGGGAAAGCCCCACTCTTGCCAGAATTTCCTGTTTTAAATCTGCATATGACTCATTTTCAGGGGCCTGGAGTGAATAGTAGGCTCATTGTGCTTCCCCGAGAGCTGTTCCATGAACTGCATTTGGTGGATGCTGACATCAGTAAGCTGGCTGATAATTTCTTCCATTATGAGAGAGAGTGCGGGTTCTGCAGAAAGTCTTGGTCCCAGTCCCAGTCCCAGTCCCAGACGCCTTCTCTGGATCTCACCATCTGTATCTTCGGTTCCCTCTGCCTGGTCTCTCCATCTGCCGGCCATATGAAGAATACCTCAACACCAAGGCCATATTTAAGTCAGATCAGCCTCCAATCTCCCAATTCATTGAATCAAGGATATCACACTACAGCTGCAACCATCCCCAGCAGAGAGCCATTACACACTCAATACTATGATCTAGTGGCAGAAAGACAGTTGAAGTTAAAAAATGACCTAGCAAAGGCAGATAATGTATCAGTGACAGTAGATATATGGTCAGATCGTAGGATGAGAGGCTTTCTAGGAGTCACAGCACACTGGCTCAGTACTGAAGATCACAGTCTGCAGTTAAAATCACAGTTGCTTGCATACAACCGCTTCAAAGGTTCTCATACTGGAGAGAGGATTTGTGAGGAATTTGAGCAGATATGTGAAGAGCTCCAGATCAGGAGAAAGGTTGAACACATCATCTGTGATAACGCGGCAAACATGAGAAAAACATTCAGCACGTTTTCAAGGACAAATAAGGAGCAAGAGATGGTTGAAAAATCTTTTAGCACCAAATCCCAGACAAGGCTCCAGTGTTTTGCTCACACTCTCCAGTTGGTCATAGGAGATGGCCTTAAAGAGACAAAATTAATCAGTGCGGCCCTTGCTAAAACCTCCAGAATGAGTTCCTTACTCCACACAAAAGCCACAGATCTTACACAAGGAGAAAAAAATGTGACCATAAGTGCTGTGGTTCCCTGTGTCCTTTCTCTTAATCACCACCTGGAAAATCAAAAGGAGAAAGTGTGCTACTTGGGCGGTTTGATCTGTAGCTTGCAAACATCCCTCAAAAGAAGATTCAGAGGGATCTTTGTTAATGTAAAGATGGCAGATGGAGAGCGTGATGGGCCATTATTGCCCTTCTCTGACTCTCTATACCTAAAAGCTGCTCTGCTGGATCCTTCATTTGGTACCATGTGGTTGACCCATGATGTCTTGGTCCCTGAAAATATCAAGGAGGCTTTGTCTGCCATGATTAAAGACTTGATTCTCAAGGAGGCATACAGGGCTACCCCGGTCCCTTCCCCCACCCATGAGCAGGAGGATCAAATAACGGTGGCAGAGCCAGAGCATCAGTCTGGACTGTTCACAGCTTACCACAAGAAGCCGAGGAGAGATTCATGTTCCAGTCCCCTTATTCAGCTGAACCACTGTTTGGATATTTGTGACGGACAGAACTCCTTGCAGTTTTGGGCCATGAACAGGCACACCCTTCCCTCTTTGTTCAAGGTAGCGATTTTTATTGTGTTAACAACTCTGCTGTATGTGGACCTTTTCAGTAGAAATGCATATTGAATTTTTTTTTTTTTGTTGCAA

Function

NR:

description
LReO_3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000052_00061936_00072645.mRNA True 3351 mRNA 0.49 10 60529 72666

Neighbor

gene id symbol gene type direction distance location
CI01000052_00045445_00045867 NA coding upstream 14534 45170 ~ 45995 (+)
CI01000052_00165058_00166912 NA coding downstream 92392 165058 ~ 166935 (+)
CI01000052_00294399_00296217 NA coding downstream 221464 294130 ~ 296806 (+)
CI01000052_00430871_00437100 NA coding downstream 357067 429733 ~ 437122 (+)
CI01000052_00437783_00438718 NA coding downstream 364612 437278 ~ 438749 (+)
CI01000052_00496215_00499293 NA coding downstream 423549 496215 ~ 499724 (+)
G222843 NA non-coding upstream 5608 54716 ~ 54921 (+)
G222838 NA non-coding upstream 29528 30791 ~ 31001 (+)
G222834 NA non-coding upstream 36944 23219 ~ 23585 (+)
G222832 NA non-coding upstream 45207 15065 ~ 15322 (+)
G222849 NA non-coding downstream 8156 80822 ~ 81062 (+)
G222853 NA non-coding downstream 21205 93871 ~ 107696 (+)
G222866 NA non-coding downstream 46338 119004 ~ 119368 (+)
G222869 NA non-coding downstream 55235 127901 ~ 128156 (+)
G222870 NA non-coding downstream 56849 129515 ~ 129771 (+)
G223545 NA other downstream 1197826 1270492 ~ 1270927 (+)
G223694 NA other downstream 1976660 2049326 ~ 2104299 (+)
G224953 NA other downstream 3358470 3431136 ~ 3460136 (+)

Expression


Co-expression Network