G223414


Basic Information

Item Value
gene id G223414
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000052
NCBI id null
chromosome length 3494004
location 1303648 ~ 1305065 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU253423
TCCAGACTTGGCCGCGAGCTCATTTTAATCTTCTGTTCAAGATTTTTGGCGATGAAGTGTGTGAGATCTCCATCATGGCTTACAGTGCCCTCCAATTCTAGCGCGCTGGATATGGTGGCCCTGCGTCCTTCCGCCTGGCCAGCTCTAGCTCCGCCTCCTCGTGCCCCGCCCCCACACGCCCCACTGATCTCATCCAGGCTTTTACTGTCCTGCATACCACGCACGACTCGATCTCGCTCTGGGACAGAGCGCACACGTACCTCCGCCATCACGTGAGCTGGGCATGGAGAATCGTCCAGGTCTGGCAGCAGAGGGGGTGTGGCCTGGTCGGGGTGAGGGGCTGGAACAAGGGGAGGGGCCTCATCAGGAGAAATGGAAGTATTTGGTTGGACTTCATCCGACGAATCAGGATTGGACCATTCATCAGGTTCAGAGTGAGTAGGAGGGTGTTCGGTTGAGAGCGCTCCAACTGGCTGTACAGAAATGAGAGTCTCTTTCCTTTGCTTGATCTCTCTCTTGTTGACATTGTTCACCTCTCCATCACTTGTCTTTCTCTCCTCCTCCTCCCTTCTCCATTCTTCCAGTTCTTTTTTAGAGCAGTCGTGTGTTAGTTCAGTCTCACAGGAGAGCGTGTCCTCGTCTGTCTCATCTTCAGTTGGAATATGTGTGCACTGGGAGTGTTGAACCAGTGACTCTGTAGGCGGGGATTCTGAGTGATCTGTGTGTGACTGGAGTGTGTGTGTGTCTCTACATGTGTCCATGTGGTGAGGTGTGTGTTTGAGAGTCTCTGACAGGGCAGGGGTGTCCATGTGAGGCTCAAAATCATCCCCATCAATGAACTTTATCTCCTGATGGGTGAAGCCATGAAGTCCTGACCAATCAGAGGCCTTAGGAGAATCAGAGGTTTCCACCCCGTTGCTTGCTTCCTGCGCATCCTGACCGATCACAGGAGAGCGGCTCATACCTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253423 True 969 lncRNA 0.53 2 1303648 1305065

Neighbor

gene id symbol gene type direction distance location
CI01000052_01295531_01298937 NA coding upstream 4445 1294194 ~ 1299203 (+)
CI01000052_01143235_01145343 NA coding upstream 156498 1143156 ~ 1147150 (+)
CI01000052_01044855_01046432 NA coding upstream 257031 1044855 ~ 1046617 (+)
CI01000052_00906265_00916799 SEMA3B coding upstream 386835 904556 ~ 916813 (+)
CI01000052_00836931_00841228 TMEM51A coding upstream 462215 835368 ~ 841433 (+)
CI01000052_01368837_01373810 OPN7C coding downstream 63772 1368837 ~ 1374198 (+)
CI01000052_01383491_01401660 NA coding downstream 77085 1382150 ~ 1402229 (+)
CI01000052_01405500_01408668 TPP1, TAF10 coding downstream 98749 1403814 ~ 1408862 (+)
CI01000052_01440901_01449517 SUV39H1, SUV39H1B coding downstream 135836 1440901 ~ 1450860 (+)
CI01000052_01468551_01480835 FOXP3A coding downstream 163486 1468551 ~ 1480982 (+)
G223552 NA non-coding upstream 25040 1278378 ~ 1278608 (+)
G223551 NA non-coding upstream 25657 1277734 ~ 1277991 (+)
G223547 NA non-coding upstream 30628 1272578 ~ 1273020 (+)
G223430 NA non-coding upstream 33893 1268682 ~ 1269755 (+)
G223410 NA non-coding upstream 59684 1234570 ~ 1243964 (+)
G223464 NA non-coding downstream 30799 1335864 ~ 1336400 (+)
G223579 NA non-coding downstream 43057 1348122 ~ 1348341 (+)
G223444 NA non-coding downstream 55028 1360093 ~ 1361800 (+)
G223597 NA non-coding downstream 190672 1495737 ~ 1495947 (+)
G223602 NA non-coding downstream 205846 1510911 ~ 1511141 (+)
G223545 NA other upstream 32721 1270492 ~ 1270927 (+)
G223694 NA other downstream 744261 2049326 ~ 2104299 (+)
G224953 NA other downstream 2126071 3431136 ~ 3460136 (+)

Expression


Co-expression Network