CI01000053_04703670_04706744 (CRYBB2)


Basic Information

Item Value
gene id CI01000053_04703670_04706744
gene name CRYBB2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 4703535 ~ 4707009 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000053_04703670_04706744.mRNA
AGCGACTGGCACACCCCGGAGCTGGTAAGACAAACATATCATTGCTTTCTTTATTATTGTTATTGATATTGTGTTATTTTCATCTCCACCAATTTATCTACTTAAGTACGGAATATAACAACTCATCCTTGTCATTCATGCTGACTGTTATGCTTTTGCAATATTCAATTATCTTCTTAATCGACACTAATAATTATAGTTTGCTTCCTACTCTGTTCCTAATTGTATTTCTGAACAAAGCTCATCACACCCATCCTGGTTCACTATGGCAACTGATCACCAGAACCCTGCAACCAAGCAAAAACAACCAGTTGCCAGTGCATTTAAGTTGGTGATCTACGAACAGGAAAACTTTCAAGGCCGCTGTCATGAGCTGACTGGGCCCTGTAACAACCTCCAGGAGGCGGACATGGAGAAAGTGGGCTCAATACTGGTGCTCTGTGGACCGTGGGTGGGATATGAGCAGCCCAGTTGTAAGGGGGAACAGTATGTGTTTGAGAAGGGTGAGTATCCTCGCTGGGACGCCTGGACCAACAGCAGACGCAGTGACTGCATCGCAGCCTTCCGCCCCATCAAAGTGGACAGCCAGGAACACAAGATCGTACTCTATGAGAACCCAAGCTTTGCTGGGAAGAAGATTGAGATCGTAGATGATGATGTTCCTAGCTTCCACGCTCATGGATACCATGAGAAAGTCTCTTCAGTTCGTGTGCAGAGTGGCACCTGGGTGGGCTATCAGTACCCAGGATACAGAGGCTACCAGTATTTGTTCGAGAAAGGAGAGTTTAAGGAGTGTTCTGAGTTTGGGGCCGTGCTGCCTCAGATCCAGTCCGTGAGGCGCATCCGTGACATGCAATATCACCCAAAAGGGGCCTTCCAACCCTCTAACTAAATACCCAGCACTCCCCTTCAAACCCCCAAAGCTTCTGAAACACCCCCTTCTTTCCCCAATCTTCACTTTTGAATGCTTATCTTTGACCCTTTCAATTTGTGTCAGTGATTCCATTTGCTACTGCTGAGAAATAAA

Function

symbol description
crybb2 Predicted to be a structural constituent of eye lens. Predicted to be involved in lens development in camera-type eye and visual perception. Is expressed in eye and lens. Human ortholog(s) of this gene implicated in cataract and cataract 3 multiple types. Orthologous to human CRYBB2 (crystallin beta B2).

NR:

description
beta B2 crystallin

GO:

id name namespace
GO:0007601 visual perception biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000053_04703670_04706744.mRNA True 1027 mRNA 0.46 5 4703535 4707009

Neighbor

gene id symbol gene type direction distance location
CI01000053_04642167_04642450 NA coding downstream 60370 4641841 ~ 4643165 (-)
CI01000053_04514278_04540909 NA coding downstream 162626 4513565 ~ 4540909 (-)
CI01000053_04494346_04508379 KCNIP3A, KCNIP3 coding downstream 194895 4494322 ~ 4508640 (-)
CI01000053_04450920_04470110 SLC23A2 coding downstream 233425 4450844 ~ 4470110 (-)
CI01000053_04423076_04430502 RASSF2A coding downstream 273033 4423076 ~ 4430502 (-)
CI01000053_04834397_04836861 NA coding upstream 127057 4834066 ~ 4837227 (-)
CI01000053_05102710_05104285 NA coding upstream 393588 5100597 ~ 5104490 (-)
CI01000053_05221746_05223262 NA coding upstream 513741 5220750 ~ 5223262 (-)
CI01000053_05302453_05304313 NA coding upstream 595190 5302199 ~ 5304313 (-)
CI01000053_05308075_05312795 NA coding upstream 599225 5306234 ~ 5312795 (-)
G227980 NA non-coding downstream 45425 4656086 ~ 4658110 (-)
G227986 NA non-coding downstream 110644 4592579 ~ 4592891 (-)
G227664 NA non-coding downstream 130308 4572812 ~ 4573227 (-)
G227752 NA non-coding downstream 290928 4412389 ~ 4412607 (-)
G227751 NA non-coding downstream 291948 4411268 ~ 4411587 (-)
G228037 NA non-coding upstream 5898 4712907 ~ 4713253 (-)
G228012 NA non-coding upstream 38732 4745741 ~ 4750012 (-)
G228060 NA non-coding upstream 69941 4776950 ~ 4777226 (-)
G228061 NA non-coding upstream 72562 4779571 ~ 4779782 (-)
G228062 NA non-coding upstream 73118 4780127 ~ 4780396 (-)
G227604 NA other downstream 615795 4087237 ~ 4087740 (-)
CI01000053_03551506_03551965 NA other downstream 1150564 3550333 ~ 3552847 (-)
G226963 NA other downstream 1706267 2996717 ~ 2997268 (-)
G226826 NA other downstream 2136463 2565892 ~ 2567072 (-)
CI01000053_02225226_02226481 YPELD, YPEL2B, YPEL1, YPELC, YPEL2 other downstream 2466139 2225210 ~ 2226481 (-)
G228651 NA other upstream 1077474 5784483 ~ 5787690 (-)
G228750 NA other upstream 1224583 5931592 ~ 5932241 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location