XLOC_009838 (BX005389.1)


Basic Information

Item Value
gene id XLOC_009838
gene name BX005389.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 19704424 ~ 19704538 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019642
GCAggtagctagctctctgcaactctcacatggtggccaactaaagctaagcagggctgcgcccagtcagtacctggatgggaaaccacatgggaaagctaggttggtgcctgaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000109691

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019642 True 115 rRNA 0.55 1 19704424 19704538

Neighbor

gene id symbol gene type direction distance location
XLOC_009836 tmem196b coding upstream 23142 19677484 ~ 19681282 (+)
XLOC_009835 macc1 coding upstream 27049 19637384 ~ 19677375 (+)
XLOC_009834 sp8b coding upstream 165648 19536614 ~ 19538776 (+)
XLOC_009833 NA coding upstream 190433 19508738 ~ 19513991 (+)
XLOC_009832 NA coding upstream 323132 19380866 ~ 19381292 (+)
XLOC_009839 twist1b coding downstream 28005 19732543 ~ 19734149 (+)
XLOC_009840 CU855688.1 coding downstream 100483 19805021 ~ 19809117 (+)
XLOC_009841 ankrd28b coding downstream 351340 20055878 ~ 20154859 (+)
XLOC_009842 c16h2orf66 coding downstream 457267 20161805 ~ 20164454 (+)
XLOC_009843 hacl1 coding downstream 463273 20167811 ~ 20194385 (+)
XLOC_009831 NA non-coding upstream 292003 19375634 ~ 19412421 (+)
XLOC_009826 NA non-coding upstream 1192225 18502566 ~ 18512199 (+)
XLOC_009821 NA non-coding upstream 2033967 17669300 ~ 17670457 (+)
XLOC_009847 NA non-coding downstream 825587 20530125 ~ 20531772 (+)
XLOC_009848 NA non-coding downstream 980402 20684940 ~ 20695517 (+)
XLOC_009854 mir196d non-coding downstream 1208875 20913413 ~ 20913484 (+)
XLOC_009859 NA non-coding downstream 1436510 21141048 ~ 21142516 (+)

Expression


Co-expression Network