G228699


Basic Information

Item Value
gene id G228699
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 5840219 ~ 5840433 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU259532
CTAAATGAACTGTGGAGGATGTAAGATGATTGACAGGCCAGTTTATGGTGACAGGATGCGACAGAGAGCAAAGACAATTGTGTGACGTGATAGTATGTCCCAAAGCTTGTCTACTCTTTTGCTACACACTCAAAAGTATGTACTTTTTGTTCACAGAAAGAGTACATACTTTTAGGGCGTAGTATAAGTAGGCGAATTGGGATGCAGCAATTACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU259532 True 215 lncRNA 0.41 1 5840219 5840433

Neighbor

gene id symbol gene type direction distance location
CI01000053_05796556_05798076 ADRA2B coding upstream 40395 5795873 ~ 5799824 (+)
CI01000053_05784784_05786704 DUSP2 coding upstream 52561 5784266 ~ 5787658 (+)
CI01000053_05764395_05769061 NA coding upstream 71134 5764395 ~ 5769085 (+)
CI01000053_05704944_05710574 GCK, GK coding upstream 129098 5704848 ~ 5711121 (+)
CI01000053_05593016_05597420 ORAI1, ORAI1A coding upstream 242731 5593016 ~ 5597488 (+)
CI01000053_05920285_05920932 NA coding downstream 79660 5920093 ~ 5921020 (+)
CI01000053_05976882_06023460 GPAT2 coding downstream 136449 5976882 ~ 6023691 (+)
CI01000053_06046867_06049295 NA coding downstream 206434 6046867 ~ 6049295 (+)
CI01000053_06050344_06056286 NA coding downstream 209911 6050344 ~ 6056649 (+)
CI01000053_06095365_06103392 OLFML2A coding downstream 254932 6095365 ~ 6104033 (+)
G228698 NA non-coding upstream 148 5839825 ~ 5840071 (+)
G228439 NA non-coding upstream 77210 5762052 ~ 5763009 (+)
G228436 NA non-coding upstream 82604 5757402 ~ 5757615 (+)
G228425 NA non-coding upstream 101968 5737817 ~ 5738251 (+)
G228716 NA non-coding downstream 43032 5883465 ~ 5884938 (+)
G228717 NA non-coding downstream 43185 5883618 ~ 5883878 (+)
G228722 NA non-coding downstream 50121 5890554 ~ 5890942 (+)
G228739 NA non-coding downstream 79052 5919485 ~ 5919756 (+)
G228749 NA non-coding downstream 91682 5932115 ~ 5932394 (+)
CI01000053_05471449_05512831 LRRC75B other upstream 327145 5471449 ~ 5513074 (+)
G228257 NA other upstream 461770 5375553 ~ 5378449 (+)
G227317 NA other upstream 1424626 4414951 ~ 4415593 (+)
G226399 NA other upstream 2142690 3620798 ~ 3697529 (+)
G226347 NA other upstream 2565308 3272374 ~ 3274911 (+)
CI01000053_06725452_06758944 NA other downstream 882766 6725452 ~ 6758944 (+)

Expression


Co-expression Network