G228717


Basic Information

Item Value
gene id G228717
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 5883618 ~ 5883878 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU259550
ATTTCCTTTTGTACTTGTGTCAAAGTGTTTAGATATGCTGTCACTTGTAAATGTTACTGCTGTTTATGTTAGCTTTCAATATATGGTTTTATCCTGATTAAAGCTTTACTGTAGCTGAATACATGACTGAGTAGTAGCATTTTTGTAAAGGTATTGTTTAATTTATAGCATGAACAACTGTTTGTCTATGAACATAGAAGTTTGTTGGTGTTTGTTAGAATTTAGCTAACTGGCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU259550 True 236 lncRNA 0.31 2 5883618 5883878

Neighbor

gene id symbol gene type direction distance location
CI01000053_05818799_05861616 NA coding upstream 21746 5818799 ~ 5861872 (+)
CI01000053_05796556_05798076 ADRA2B coding upstream 83794 5795873 ~ 5799824 (+)
CI01000053_05784784_05786704 DUSP2 coding upstream 95960 5784266 ~ 5787658 (+)
CI01000053_05764395_05769061 NA coding upstream 114533 5764395 ~ 5769085 (+)
CI01000053_05704944_05710574 GCK, GK coding upstream 172497 5704848 ~ 5711121 (+)
CI01000053_05920285_05920932 NA coding downstream 36215 5920093 ~ 5921020 (+)
CI01000053_05976882_06023460 GPAT2 coding downstream 93004 5976882 ~ 6023691 (+)
CI01000053_06046867_06049295 NA coding downstream 162989 6046867 ~ 6049295 (+)
CI01000053_06050344_06056286 NA coding downstream 166466 6050344 ~ 6056649 (+)
CI01000053_06095365_06103392 OLFML2A coding downstream 211487 6095365 ~ 6104033 (+)
G228699 NA non-coding upstream 43185 5840219 ~ 5840433 (+)
G228698 NA non-coding upstream 43547 5839825 ~ 5840071 (+)
G228439 NA non-coding upstream 120609 5762052 ~ 5763009 (+)
G228436 NA non-coding upstream 126003 5757402 ~ 5757615 (+)
G228722 NA non-coding downstream 6676 5890554 ~ 5890942 (+)
G228739 NA non-coding downstream 35607 5919485 ~ 5919756 (+)
G228749 NA non-coding downstream 48237 5932115 ~ 5932394 (+)
G228823 NA non-coding downstream 150675 6034553 ~ 6034779 (+)
G228824 NA non-coding downstream 163553 6047431 ~ 6047672 (+)
CI01000053_05471449_05512831 LRRC75B other upstream 370544 5471449 ~ 5513074 (+)
G228257 NA other upstream 505169 5375553 ~ 5378449 (+)
G227317 NA other upstream 1468025 4414951 ~ 4415593 (+)
G226399 NA other upstream 2186089 3620798 ~ 3697529 (+)
G226347 NA other upstream 2608707 3272374 ~ 3274911 (+)
CI01000053_06725452_06758944 NA other downstream 839321 6725452 ~ 6758944 (+)

Expression


Co-expression Network