G231293


Basic Information

Item Value
gene id G231293
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 3449780 ~ 3450241 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU262478
AAAAACTACAGATCAAGAGAGCTGAAAGATGGGTCTCAGCATCTGGTGATATATTTTTAATAACATTAATAGACTGCTGGCTTTGAGGATGATGACCCAGAAAGAGGCCAAATGAAGAATGTGTGTGAAAGAGAGACAGTGTAGAAGACAACAGCAGGCTTTGACAAGGGAAAGGAAGAGTGTATTGGAGTGTGTTAGAACGTGCTTGTGTACTCTAGGAGAATGAATGGATGACCGAGTGGGTTTGCAGAGCGTGAATGAAGCCAAGCAAGCTGGAAAAAAAAAGAAAAAAAAAAAAGAAAAAAATGACAGGGACAGGGGGCTGAACGGGCAGCTCTCTCCAGGTCTAAACTGCTGGCTTCACACTGGACGCATTTTAATAGCAGCCCAGAAAAGAACTGAATATTACATGAGCACACATACACAGAGTTCCTACTTGAATTTCAGAATTTTTCATCCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU262478 True 462 lncRNA 0.42 1 3449780 3450241

Neighbor

gene id symbol gene type direction distance location
CI01000054_03424472_03425704 NA coding upstream 23347 3423054 ~ 3426433 (+)
CI01000054_03016199_03016501 NA coding upstream 433087 3015959 ~ 3016693 (+)
CI01000054_02975008_02985278 EFCAB1 coding upstream 464445 2974588 ~ 2985335 (+)
CI01000054_02951289_02967370 NA coding upstream 482120 2950915 ~ 2967660 (+)
CI01000054_02824071_02824355 NA coding upstream 625138 2824025 ~ 2824642 (+)
CI01000054_03558982_03663042 ADGRB2 coding downstream 108741 3558982 ~ 3663042 (+)
CI01000054_03670684_03671857 NA coding downstream 220443 3670684 ~ 3672003 (+)
CI01000054_03707961_03761024 ADGRB2 coding downstream 257594 3707835 ~ 3761112 (+)
CI01000054_03848427_03914231 NA coding downstream 398186 3848427 ~ 3914231 (+)
CI01000054_03955331_03962388 NA coding downstream 505090 3955331 ~ 3962395 (+)
G231286 NA non-coding upstream 16198 3433308 ~ 3433582 (+)
G231273 NA non-coding upstream 38855 3410599 ~ 3410925 (+)
G231270 NA non-coding upstream 44261 3405217 ~ 3405519 (+)
G231209 NA non-coding upstream 90247 3359271 ~ 3359533 (+)
G231015 NA non-coding upstream 310117 3139393 ~ 3139663 (+)
G231294 NA non-coding downstream 1150 3451391 ~ 3451658 (+)
G231295 NA non-coding downstream 2090 3452331 ~ 3452550 (+)
G231350 NA non-coding downstream 382061 3832302 ~ 3832605 (+)
G231353 NA non-coding downstream 464608 3914849 ~ 3916392 (+)
G231691 NA non-coding downstream 641363 4091604 ~ 4092027 (+)
G230689 NA other upstream 362388 3078502 ~ 3087392 (+)
CI01000054_02289802_02330591 SLC25A13 other upstream 1145398 2289802 ~ 2330981 (+)
CI01000054_01725792_01726688 NA other upstream 1722987 1725627 ~ 1726793 (+)
CI01000054_01650242_01665628 PLEKHO1A other upstream 1788215 1650242 ~ 1666115 (+)
CI01000054_01578022_01579167 NA other upstream 1867711 1578022 ~ 1579356 (+)
G231863 NA other downstream 956911 4407152 ~ 4450730 (+)
CI01000054_05608892_05634793 RNF19B other downstream 2172774 5608457 ~ 5634804 (+)
G232558 NA other downstream 2543419 5993660 ~ 6041863 (+)
CI01000054_06305908_06312122 NA other downstream 2854066 6305908 ~ 6312163 (+)

Expression


Co-expression Network