CI01000119_01250861_01260985



Basic Information


Item Value
gene id CI01000119_01250861_01260985
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000119
NCBI id null
chromosome length 2769458
location 1249506 ~ 1261077 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000119_01250861_01260985.mRNA
AGTTGACAGGAGATCACTGGAGATCACAGCAAAATTTCAAAGCTGTTAAATCCCAAGTGTCACAAATACAGCTTTCAAAAATCAGCTCAGACATGCTGCTCACAGCGGAGAGGACCTTGAACAGGCTTGACGTTACTGTGTTTAGACCCTGGAGAGAGGATGTCAACACACTGTCCTGCAGCCCACAATTGGTGTATCTCATCAATGTCACATACTCTGACTCCACATCCCACGTCATCTACAGAAGATACAGTAAATTCTTTGACCTTCAGCTTGGAGACTGGTTACAGTGGATTCTCTATTCCATAAGGATATGCAGGTTACTCCTCTCATACTCCTTAGAGGAGGTGGGTGTGTCTCATTGTCAAGTACACTGGCAGTGCTCCAGTGCTGTACTATGCTCAGGTCTTCATCTTATCGTACAGCACTGCAGAGTCCTGACACCTGCATTATGCATGAGGAAGAAGAAATGTAAAGAGAAGTGTAATACAATGAATGTTCGTGCTCTGGAAAATGGAGGGTCATTCAATCTAGATTTGGGAATGCGTAGGCAGTGCAGCCCGGCCCGAAAGTCCAAAATGGGTGTCTAGACCACAAGGCATTGCAGGCACGCCAATGGCACCGATGGCTGAAGTAACTCAAGGCCTCAGCACTTTGGGGCGTTCAGGGACGCTCCACTCTGCCTACTGTACTGATGTCAGTGTGGGAAGAAGGAGCTTGATTGTTGAAGCTGGATAAAGGCTTGTTTCATGAGCAAGGTCGAGTTGTAGTCAGGAGACCGACACCTACACTTCAGAGACACACTGGCCTTGTGCTCAAAGGGACAATGGAGGGTTTTGAGCCTGTGGTGAAGAGAGAAGTTGCCCTTGGCTCCTGATCTGAGGCCAGAGTTGTGCAAGCAAGAAAAGCAAGAGAGACTAAATTTAGTGTTTCATAGTCCAGTCCATTTAGAAGGAGGTTTCCATCCTACTGTAGTTATTTCTTTATTTAACTCTCTATTTTATGTTTGGGTTTCGGAACCAACCAGAGAGAGACACACACACAAAATCTTTATCATTACAATATGAATTCAAACCTTTTTTATTAAGTAACTAAATTTATTTAATTTCTATAACTAAATTATCTGGACTTCATGCTATTTTTATTTTATTTTATTTTTTATTGTTTTTGAAGGAATCTTATTAATAAGTATCTTTTTATTTTTTATTGTCATATATTATTATTTAAAATTATATCATTTTATTTCTAAAAAAAGTATTTTATTATAAATATTATTATTATTGTTTAATGTTATTATTTTATTTTTTATTTGATTTAATTATTTTGTTTAATTTTATTTATATATTATATATCTATATATTATTTATATATTTGTCATTAAATTCTTCCATAACTAAATTATGTGGACTAAAAACAAAAGCGCTCAAGTCAGCCTTGTTTAAGCTGGTGTCTTTCAGCTTGACCAGCTGGAGAAAGTCTGTAATTCTTGCCAACAGACCAGCTTGACTAAGTTGTGAAATCAACTAAGATCAGCATTTTTTTCATTTGTTTCACTTGTTATTTTTCCTATTGAAACATCTGAGACAAAGCTGAATGCTTAAATGAAACCTATTTGGAGAGCTTCCAAAGCTAAGCTTTGAATGTAAAGTTTTGTGTAACAGGATGTGTGATCTGGACTTGTGTGCCAGTGTTGTGATGGATCTAGTAATGAAGTGGGACTCTTTTGATGTGTTTGCTGTTGTGGCTGTGGTCATGTTTGTGTGTGTACTCACATGTCTGAATGTGGGTTTATTGTGCGTTTCTCTGTGTTGTTGCCAGACTCTGGGCTTTTGACCACCTCTCTGATGTCTTTTGATGTTTTCATAGACTTTGAGTCTGTACTGCCACACAAACAAGCTTTGAGCTAGTATACGACTGAAACCAGCCTATAAGCTATTAGAATAAA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000119_01250861_01260985.mRNA True 1945 mRNA 0.38 6 1249506 1261077

Neighbor


gene id symbol gene type direction distance location
CI01000119_01195573_01235466 NA coding downstream 13967 1193810 ~ 1235539 (-)
CI01000119_01185695_01186597 NA coding downstream 61513 1185336 ~ 1187993 (-)
CI01000119_01161178_01175649 SH3PXD2AA, SH3PXD2A coding downstream 72849 1160480 ~ 1176657 (-)
CI01000119_00939473_01062625 CFAP58 coding downstream 186881 939311 ~ 1062625 (-)
CI01000119_00691777_00879449 NA coding downstream 370057 691777 ~ 879449 (-)
CI01000119_01277614_01286844 NA coding upstream 16499 1277576 ~ 1286844 (-)
CI01000119_01289193_01294766 LRRC58A coding upstream 27978 1289055 ~ 1294766 (-)
CI01000119_01297333_01303971 FSTL1A, FSTL1B, FSTL1 coding upstream 36154 1297231 ~ 1303971 (-)
CI01000119_01319695_01320873 GJA8, CX44.1 coding upstream 57706 1318783 ~ 1321201 (-)
CI01000119_01346109_01356546 BCL9 coding upstream 84104 1345181 ~ 1356546 (-)
G337674 NA non-coding downstream 22610 1216613 ~ 1226896 (-)
G337687 NA non-coding downstream 42387 1205986 ~ 1207119 (-)
G337645 NA non-coding downstream 176571 1072681 ~ 1072935 (-)
G337491 NA non-coding downstream 629616 619517 ~ 619890 (-)
G337486 NA non-coding downstream 636387 612802 ~ 613119 (-)
G337673 NA non-coding upstream 12387 1273464 ~ 1276036 (-)
G337675 NA non-coding upstream 53465 1314542 ~ 1315769 (-)
G337688 NA non-coding upstream 118372 1379449 ~ 1450252 (-)
G337680 NA non-coding upstream 157350 1418427 ~ 1426429 (-)
G337679 NA non-coding upstream 168960 1430037 ~ 1432642 (-)

Expression



Co-expression Network