XLOC_001454 (si:ch211-239f4.6)


Basic Information

Item Value
gene id XLOC_001454
gene name si:ch211-239f4.6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 45138905 ~ 45146834 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00002382
TCTGTGCTCATTTAGAGGTGACCACAGACTGGTAACAGGACTTTAATTGCTATAAGGATTAATCTGGACTGCATTTTTTCCTTGGTGGAACAATCCAAAAGCTCAGTGCTATAAAAAATAGCAATGGAGTGGAGGATAATACTATTCATCCTTTGTCTGATTGGGATCCTACATCTGCCTGGAAATGTTGTTTCTCAAGCAACTACACCTTCAATCGTGCCTTCAGCAACTACACCTTCAACTGGGACTTCAGCAACTACACCTTCAACTTCGACATCAGCAACTACACCTTTAACTGTGACTTCAGCAACTACACCTTCAACTGCGACATCAGCAACTACATCTTTAACTGCAACATTAGCAACTACACCTTCAACTGCGACATCAGCAACTACACCTTCAACTGCGACATCAGCAACTACACCTTCAACTGCAACATCAGCAACTACACCTTCAACTGCGACATCAGCAACTACACCTTCAACTGCGACATCAACAACTACACCTTTAACTGCGACATCAGCAACTACACCTTCAACTGCGACATCAGCAACTACACCTTCAACTGCGACATCAGCAACTACACCTTTAACTGGGACTTCAGCAACTACACCTTCATTTGCAACTTCAGTAACTATACCTACAACTGAGACTTCAGCAACCACACATTCAACTATGACTTTGGCAACTTCTGTATCAACTGTGACCTCAGTAACTACACTTTCAACTGTGACTGGAGCAACTCCAGTTTCAACTGCAAATTCAATAACTACACCTTCAACTGCAACTACAGTAACTACACCTTTAACTGTGACAAGAGAAACTACACCTTCAACTGTGACTAGTGTAACTACACCTTCAAATACAACTAGATCAAATTCAGCTTCAACTGTGACTGGATCAGCTTCATCTTCAACTGGAGGGAATTCTGCAACAGGAACATATCAAACTACAACAGCCCCACCACCTGCCAATCTTGGAGTTATTTCTTTAAGTTTCAAGCTTAATGACACATTCCAGGCAGTCTACACTGACCTCAATAATGCAGTGACCAAAGCGtatgtagaaaatattaaatCTCAGTTTTATCCAGTTTACAAGAAACGTTATCCAAACTACTTTGGGATGATTATTAATAAGTTGAGTGCGGGCTCTGTTGCGGCAGATTCCACCCTTCAATTTGATACCACCAGTTCCACGACTCCTAGTGCAACAGATGCAAAAAACACGCTCATTCAAGCAATTAACAGTGGAGGCATCAACCTAACAATTGATAATACATCTATCACTGCTGTGCAAGTCTCAAGCAACGGAACGAGCACAGCGGCTTCATCAACTGCTATGACTCAAACTACGACAGTAGCCACAACAGCCTTAGTCCTAGCCAACTATAATATCACCTTCAAAATATTACGCGTCTTTATCAGTGATCTGGCGAACCTCAGCTCTAATGCAGCTGGTAATCTGGCACCGGTGGTCAATAGTCAGCTGACTGGGTTTTTCAGCAATTTCAGAGGCTTCTATCAGACAAACGTTTGGCGGTTCAGGAATGGCTCCATTGTAGTAGATGCTTGGCTTGCATTTATCAAAAACATCAATGCTCCTAAAGCAACAGAGCTGGCTGAACAATTTGCTGCTGCTGTCAGAAACCAAACAATCTTATTGCCAATTGATCCTACAACGATCAAAGTCACAGACTTCACAGGATTCACTGcCAACAAGTCTCAGGTGCTGGCTAGTATGCTAACAGCATTGTGGATGACCTTAGCATCCCTTCTGTTTTCAGCTGTGATACACTAAGCTTCACATTCACTTCagcaaaaacacaacataatgCTACTACACAACAATCATGGCTGTGGTCACACTCAGAAAATCAAGATGCAAACAAGTGAAAATATGATCTAACTTTATCACTTATGGTCTTTCTTGTCACATTTAGTGCCTGGTGGTACATATGGTTTGTGTGTGTTATGGTAAGTTGGTCTCACAATGCACATTGAGGATAAATGAGGATTGGTTTATTAAAACCGAATCTGAAGAGACCTCTAGTCCACAGAAATG

Function

symbol description
si:ch211-239f4.6 Predicted to be located in membrane. Predicted to be integral component of membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093347

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00002382 True 2064 mRNA 0.42 10 45138905 45146834

Neighbor

gene id symbol gene type direction distance location
XLOC_001453 NA coding downstream 42732 45092944 ~ 45096173 (-)
XLOC_001452 rps6 coding downstream 89302 45043767 ~ 45049603 (-)
XLOC_001451 smu1b coding downstream 96695 45012391 ~ 45042210 (-)
XLOC_001450 tmem176 coding downstream 197952 44935442 ~ 44940953 (-)
XLOC_001449 si:dkey-9i23.14 coding downstream 205811 44930457 ~ 44933094 (-)
XLOC_001455 mucms1 coding upstream 3010 45149844 ~ 45157243 (-)
XLOC_001456 zgc:111983 coding upstream 26587 45173421 ~ 45177401 (-)
XLOC_001457 ddx39aa coding upstream 59086 45205920 ~ 45215343 (-)
XLOC_001458 LO017716.1 coding upstream 160327 45307161 ~ 45313876 (-)
XLOC_001459 si:ch73-90k17.1 coding upstream 169229 45316063 ~ 45320126 (-)
XLOC_001440 BX908740.2 non-coding downstream 602687 44534625 ~ 44536218 (-)
XLOC_001427 CR385050.3 non-coding downstream 1185278 43952298 ~ 43953627 (-)
XLOC_001417 NA non-coding downstream 1521736 43518209 ~ 43617169 (-)
XLOC_001416 NA non-coding downstream 1983452 43130890 ~ 43155453 (-)
XLOC_001464 NA non-coding upstream 492298 45639132 ~ 45647846 (-)
XLOC_001466 NA non-coding upstream 550000 45696834 ~ 45700570 (-)
XLOC_001468 NA non-coding upstream 685941 45832775 ~ 45837990 (-)
XLOC_001469 NA non-coding upstream 692161 45838995 ~ 45839877 (-)

Expression


Co-expression Network