G96454


Basic Information

Item Value
gene id G96454
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 85941941 ~ 85943032 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU106492
acctAATAAACAGAAacgtacgctcaccacgctgcaccttggtccgcctCTTACGACGCCCGTgacatttccattcaaaatcatattttccctaacccctaaccctaaatctaactctaaccttaacccaaagcCTAACCGTGACTACAAACCCCTTACCCTAACACTATATGTACTGTAACCCTaactcctacccctaacccttaccctcaacctaactctaacccctaatccttaccctcaacctaactcctacccctaacccttaccctcaaCCTAACTCCTACCCCTAATCGTTACCTTCAACCTAATTCCTACCCCTAATCCTTACCTTCAACCTAACTACTACCCCTAATCCTTACCTTCAACCTAACTCCTACCCCTAATCCTTACCCtcaacctaactctaacccctaacccttaccctcaacctaaccctaaccctaaccctaccctcaacctaactcctacccctaacccttaccctcaacctaaccccactaaccctaaccctcaccctaaccctaaccctaacccctaacccttaccctcaacctaactcctacccctaacccttaccctcaacctaaccccactaaccctaaccctcaccctaaccctaaccctaacccctaacccttaccctcaacctaactcctacccctaacccttaccctcaacctaaccctaacccctaatccttaccctcaacctaactcctacccctaacccttaccctcaacctaactcctacccctaacctttaccctcaacctaacccctaccccaaaccttaaccctcaacctaactcctacccctaacccttaccctcaacctaactcctacccctaacctttaccctcaacctaactcctaccccaaaccttaaccctcaacctaactctaacccctaaccatttttaccttgtccctgagctgacaaggtaaaaatctgtcgttctgcccctgagcaaggcagttaacccactgttccccgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106492 True 999 lncRNA 0.49 2 85941941 85943032

Neighbor

gene id symbol gene type direction distance location
LOC118964521 NA coding downstream 309782 85630601 ~ 85632159 (-)
LOC110519057 col19a1 coding downstream 317225 85358222 ~ 85624716 (-)
LOC110510598 LOC106594326 coding downstream 642300 85247338 ~ 85299641 (-)
LOC110510599 LOC106613623 coding downstream 697500 85213382 ~ 85244441 (-)
LOC110516660 tarbp1 coding downstream 734672 85171944 ~ 85207269 (-)
LOC110513354 LOC106569852 coding upstream 279164 86222196 ~ 86223952 (-)
LOC110531234 LOC106563028 coding upstream 292207 86235239 ~ 86287517 (-)
LOC110531245 LOC106562987 coding upstream 356008 86299040 ~ 86349770 (-)
LOC110532855 LOC106562987 coding upstream 410648 86353680 ~ 86402164 (-)
LOC118966040 LOC106592896 coding upstream 659290 86602322 ~ 86650167 (-)
G96452 NA non-coding downstream 4486 85937175 ~ 85937455 (-)
G96438 NA non-coding downstream 25263 85916336 ~ 85916678 (-)
G96435 NA non-coding downstream 30247 85910355 ~ 85911694 (-)
G96429 NA non-coding downstream 41832 85898573 ~ 85900109 (-)
G96423 NA non-coding downstream 57330 85884244 ~ 85884611 (-)
G96491 NA non-coding upstream 111960 86054992 ~ 86055225 (-)
G96493 NA non-coding upstream 123038 86066070 ~ 86066689 (-)
G97048 NA non-coding upstream 126594 86069626 ~ 86135990 (-)
G97053 NA non-coding upstream 130628 86073660 ~ 86076651 (-)
G97062 NA non-coding upstream 159310 86102342 ~ 86104018 (-)
G96002 NA other downstream 590175 85346858 ~ 85351766 (-)
G95784 NA other downstream 782628 85157742 ~ 85159313 (-)
G95624 NA other downstream 961669 84979733 ~ 84980272 (-)
G97047 LOC106577388 other upstream 202977 86146009 ~ 86153321 (-)
G97176 NA other upstream 449529 86392561 ~ 86393089 (-)
G97251 NA other upstream 623445 86566477 ~ 86623311 (-)
G97308 NA other upstream 844025 86787057 ~ 86788052 (-)
G97535 NA other upstream 1351325 87294357 ~ 87294999 (-)

Expression


Co-expression Network