Gene
RNA
| Item | Value |
|---|---|
| gene id | G96493 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 86066070 ~ 86066689 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: shematrin-like protein 1, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU106535 | True | 251 | lncRNA | 0.54 | 2 | 86066070 | 86066689 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531925 | adgrb3 | coding | downstream | 18894 | 85891577 ~ 86047176 (-) |
| LOC118964521 | NA | coding | downstream | 433911 | 85630601 ~ 85632159 (-) |
| LOC110519057 | col19a1 | coding | downstream | 441354 | 85358222 ~ 85624716 (-) |
| LOC110510598 | LOC106594326 | coding | downstream | 766429 | 85247338 ~ 85299641 (-) |
| LOC110510599 | LOC106613623 | coding | downstream | 821629 | 85213382 ~ 85244441 (-) |
| LOC110513354 | LOC106569852 | coding | upstream | 155507 | 86222196 ~ 86223952 (-) |
| LOC110531234 | LOC106563028 | coding | upstream | 168550 | 86235239 ~ 86287517 (-) |
| LOC110531245 | LOC106562987 | coding | upstream | 232351 | 86299040 ~ 86349770 (-) |
| LOC110532855 | LOC106562987 | coding | upstream | 286991 | 86353680 ~ 86402164 (-) |
| LOC118966040 | LOC106592896 | coding | upstream | 535633 | 86602322 ~ 86650167 (-) |
| G96491 | NA | non-coding | downstream | 10845 | 86054992 ~ 86055225 (-) |
| G96454 | NA | non-coding | downstream | 123038 | 85941941 ~ 85943032 (-) |
| G96452 | NA | non-coding | downstream | 128615 | 85937175 ~ 85937455 (-) |
| G96438 | NA | non-coding | downstream | 149392 | 85916336 ~ 85916678 (-) |
| G96435 | NA | non-coding | downstream | 154376 | 85910355 ~ 85911694 (-) |
| G97048 | NA | non-coding | upstream | 2937 | 86069626 ~ 86135990 (-) |
| G97053 | NA | non-coding | upstream | 6971 | 86073660 ~ 86076651 (-) |
| G97062 | NA | non-coding | upstream | 35653 | 86102342 ~ 86104018 (-) |
| G97047 | LOC106577388 | non-coding | upstream | 84781 | 86146009 ~ 86153321 (-) |
| G97086 | NA | non-coding | upstream | 95465 | 86162154 ~ 86163303 (-) |
| G96002 | NA | other | downstream | 714304 | 85346858 ~ 85351766 (-) |
| G95784 | NA | other | downstream | 906757 | 85157742 ~ 85159313 (-) |
| G95624 | NA | other | downstream | 1085798 | 84979733 ~ 84980272 (-) |
| G97176 | NA | other | upstream | 325872 | 86392561 ~ 86393089 (-) |
| G97251 | NA | other | upstream | 499788 | 86566477 ~ 86623311 (-) |
| G97308 | NA | other | upstream | 720368 | 86787057 ~ 86788052 (-) |
| G97535 | NA | other | upstream | 1227668 | 87294357 ~ 87294999 (-) |
