AMCG00003475


Basic Information

Item Value
gene id AMCG00003475
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 4689484 ~ 4695337 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003475
ATGCCAATGGATCTGGAAGGGAATGACTTACTGGCGGAATTGACAGACCGGCTACAGTTCATCGACCTGCTGAAGAGGATGCTGAAGATGGACCCAGATGACAGGATTACCCCCATCCAAGTCCAGAACCATCCATTTGTCACCTTGACACATCTATTTGAGTTCCTCCCCAGCACATATGTTATGTCTTGTGCCCAGGACATGGAGGTCTGCTATAGTCGAGTCAATACCAACACAGACCCCAGCAAGACCTCCAACAGCCAGCTCAACGCTGCCCCCAACATGACGTCCAACAGCCAGCTCAACACAGCCCCCAGCACAACCTCCAACAGCCAGCTCAATGCAGCCCCCAACATGACGTCCAACAGCCAGCTCAACACAGCCCCCAGCATGACCTCCAAGAGCCAGCTCAATGCTGCACCCAACCAGTCACAGCAACTCATGGCTGCAGAGGGGAACGAAGGGCACTGCGGGCAACCAGATATCATCACCCCCACCATAGCTGCTGGTGTAGTGTTGCTATGCAGAGGGGAACTTGGCCATCACTGGATACCTGGTGAAAAACCCCTCTGCCCAATGCAATTCTGTCCCATGGAAGTGTTTGGGGTGCAGCTCAGGATTGCCACAGATGACATCTACAGCTGGTTTTACCCTCAGTACCACCGGCCCCTGCGGCTCTTGCTGGGTAGGCCAGTCTTTTTGGAGGTGCAGGTGCTGAATTCTCCTGACCCCAGCCTAGTGCTGCTGGTGCACTGTGTTGCCTACCCTCACTCTGCACAGGCTGTCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003475 True 789 mRNA 0.55 3 4689484 4695337

Neighbor

gene id symbol gene type direction distance location
AMCG00003468 NA coding upstream 145723 4541643 ~ 4543761 (+)
AMCG00003474 NA coding upstream 217753 4471337 ~ 4471731 (+)
AMCG00003467 eif2b4 coding upstream 254017 4427711 ~ 4435467 (+)
AMCG00003465 NA coding upstream 323252 4350519 ~ 4366232 (+)
AMCG00003463 NA coding upstream 399536 4280112 ~ 4289948 (+)
AMCG00003478 LOC108428732,LOC107594120,LOC107734000,LOC107552030,LOC106571024,LOC103363535 coding downstream 479678 5175015 ~ 5187273 (+)
AMCG00003481 NA coding downstream 640154 5335491 ~ 5339847 (+)
AMCG00003485 NA coding downstream 683691 5379028 ~ 5402540 (+)
AMCG00003487 NA coding downstream 768422 5463759 ~ 5506907 (+)
AMCG00003495 NA coding downstream 1056806 5752143 ~ 5753261 (+)
G752 NA non-coding upstream 135839 4552898 ~ 4553645 (+)
G742 NA non-coding upstream 205214 4483890 ~ 4484270 (+)
G690 NA non-coding upstream 309665 4326653 ~ 4379819 (+)
G684 NA non-coding upstream 314545 4296559 ~ 4374939 (+)
G646 NA non-coding upstream 599165 4086896 ~ 4090319 (+)
G907 kbtbd11 non-coding downstream 855408 5550745 ~ 5556306 (+)
G908 NA non-coding downstream 862270 5557607 ~ 5558515 (+)
G960 NA non-coding downstream 1134122 5829459 ~ 5829745 (+)
G983 NA non-coding downstream 1260267 5955604 ~ 5955820 (+)
G990 NA non-coding downstream 1290701 5986038 ~ 5986394 (+)
AMCG00003469 NA other upstream 167084 4514031 ~ 4522400 (+)
AMCG00003473 NA other upstream 234342 4452564 ~ 4455142 (+)
AMCG00003480 NA other downstream 608113 5303450 ~ 5334752 (+)
G1012 NA other downstream 1792355 6487692 ~ 6494905 (+)
AMCG00003524 rps7,LOC107668222 other downstream 2802703 7498040 ~ 7504015 (+)
AMCG00003534 id2,LOC106566577 other downstream 3953788 8649125 ~ 8652470 (+)
AMCG00003541 asap2,LOC106566627 other downstream 4205119 8900456 ~ 8941751 (+)

Expression


Co-expression Network