AMCG00003500


Basic Information

Item Value
gene id AMCG00003500
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 6266901 ~ 6267507 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003500
ATGAGTCAAACTGAACTTGaaagtgttttctgtgctgCACACACTTTGCAACTTAGCAGTAAGAAAGCATTGCAAATTACTTCCATTGACAATCTTCTCTCACGGAGCTGTAAAATAGTTTGTCATTTCAAACACAGCCCTGCTAGCAATGTTGAAATGTGTACAAAAGTAACAGAGCTCGGACTAAGCCATAAGAAACTGGAACAGGATGTCCCCGTGCAGTggaacagtacatttaaaatgattagcAGTCTTCTTGCGGTAAAGGATGCAGTGCATAAAGTAACAGAAGGAGGGAGTGAATGTGTGTTGAGTGCTGTAATTCCCGCAATATCTCATTTGCGACTACAGATGGCATTTTCAGACAACGATCCAGCTTTCTTTGCTCGATTCAAACATACTCTTTTTGATAACTTGACTGAAAGAATGAGCAACTGGCCACGAATcgagaaatacaaaatgtctaCAACCCTTGACCCTGGATTCAAGACTCTCCaatgcatttctattttaaaaactgGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003500 True 522 mRNA 0.40 2 6266901 6267507

Neighbor

gene id symbol gene type direction distance location
AMCG00003496 NA coding upstream 351309 5914471 ~ 5915592 (+)
AMCG00003497 NA coding upstream 441169 5824581 ~ 5825732 (+)
AMCG00003498 NA coding upstream 496964 5767358 ~ 5769937 (+)
AMCG00003495 NA coding upstream 513640 5752143 ~ 5753261 (+)
AMCG00003487 NA coding upstream 759994 5463759 ~ 5506907 (+)
AMCG00003499 NA coding downstream 107752 6375259 ~ 6376299 (+)
AMCG00003501 NA coding downstream 353304 6620811 ~ 6646702 (+)
AMCG00003505 NA coding downstream 456023 6723530 ~ 6736370 (+)
AMCG00003506 NA coding downstream 551109 6818616 ~ 6825710 (+)
AMCG00003507 NA coding downstream 560422 6827929 ~ 6870265 (+)
G990 NA non-coding upstream 280507 5986038 ~ 5986394 (+)
G983 NA non-coding upstream 311081 5955604 ~ 5955820 (+)
G960 NA non-coding upstream 437156 5829459 ~ 5829745 (+)
G908 NA non-coding upstream 708386 5557607 ~ 5558515 (+)
G907 kbtbd11 non-coding upstream 710595 5550745 ~ 5556306 (+)
G1146 NA non-coding downstream 805897 7073404 ~ 7073609 (+)
G1187 NA non-coding downstream 1097437 7364944 ~ 7365477 (+)
G1218 NA non-coding downstream 1221938 7489445 ~ 7489881 (+)
G1241 NA non-coding downstream 1256354 7523861 ~ 7750465 (+)
G1242 NA non-coding downstream 1259352 7526859 ~ 7528458 (+)
AMCG00003480 NA other upstream 932149 5303450 ~ 5334752 (+)
AMCG00003469 NA other upstream 1744501 4514031 ~ 4522400 (+)
AMCG00003473 NA other upstream 1811759 4452564 ~ 4455142 (+)
G1012 NA other downstream 220185 6487692 ~ 6494905 (+)
AMCG00003524 rps7,LOC107668222 other downstream 1230533 7498040 ~ 7504015 (+)
AMCG00003534 id2,LOC106566577 other downstream 2381618 8649125 ~ 8652470 (+)
AMCG00003541 asap2,LOC106566627 other downstream 2632949 8900456 ~ 8941751 (+)
AMCG00003544 NA other downstream 2808383 9075890 ~ 9106765 (+)

Expression


Co-expression Network