AMCG00003501


Basic Information

Item Value
gene id AMCG00003501
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 6620811 ~ 6646702 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003501
ATgtggaaaaaaagcaaaagcaaggTGTTAATAGATGATGCGTCGGAGGAGGACGACACCACGTTTCAACGGCAGTACACGAACAAGGAGAAGGGTAAAAAATCCAAGactaagaaagaaaagaaggaaaagaaaccaCTTTTTGTTCAAGACGATGAACACTATCTGTTGACTGGAGTCACACCCACAAATGGAAAAGGGTCCaccaagaagaagaacaaggaagATGAAAAAAGTAAGATGTACCTGGAGAAAAGCTACTGCTTCTGGGACAGTGTGACAATGACGATGAAACAGATCACCCCCACCAAGAAACTGGATAAGATCGAAGGTTGGGAGCCTCCACAAGTCCCCGAAGTCATAGAAGAACACATGGCTAGAGACACGTTTGCACAGCTTGCTGAAGCAGCCTCTTGGCCCGGACTGGAGGAGGACACATCAAATTATTCCAACTTGACCGACCCAGAGAACTCGGGCTCAAAATGGAGCATCAAAGCGAAAGGAAAATTCGCCGGCATGAGAAGACGGAGCAAGGGGAGTGTGTCTGAAAGTTGGGAAGGACTCCGATAAGTTCTTCGCCACTTTAAGATGGTGATCGCAGAACACCTGCCTGAATCTTTGCTGcctattaaaaatatacaaaattaatgattctcgtaaaatttaaaaacaaacaaaaaaaaataataaccattgCAGCAAAACCTATAAAGATTgcaatctgaaaatgaaaagcctTATGCTGCCTTTTTGACATGTCCACTGGCCTTTatgatattaattatatttcaacatgcaatagattttttaaaaattgtataaCCCCATGTAAAATTTTGTGCGAATACTGTCTACCTGCTGTTTTGtgatcttatttaaaaaatgttttgtacatGTTTTGGTTTGAAGTCCTCCTGGCAGAGGTATTGCACCCTACTTCTCCTACCTGTAACACTACAAAGGAGAAATTTACAGGTTTTCATTTGGAACATGAAATGTATTGTAAGATTTAACCTACCATGTGCTTCTCCCAAGCTTATTGTAAAATGCTTAGCTtatgatattgtattttttttgacTCCCAGGAACCTTCTGAAACCTGAatcttgaaaatatttttatactATAAGGGCAGTTTTTTTGAGCATTAAGGTGGTATTTTGAGGCCTGTATGTCATTTTATTAACCTTGTAGAGTGTAGAACAGAATTACCACTGCTAACGTATTAAATAAGTGCAGTATATTTGGGGAGGAGTCGGCTTGAATCTACCAATTTCCATAGCTCTGTTTCCACGGAAGAACAAAAGGCTATTgactgaatattaatattatcaatCAAATCGCACCATTTGTTATTATCAGACATAACATAACTTTGAAATCCTTTAGAAATGTTCCATTGTCTAGTTGCAGGAGCTGTAAGGACTGTCACGCCTATGTTGGGTGATGTTTTTCTATATACCATGTAAAACTACTGTCAAACAGGGCTTCTCCATTGTATCGTTTTTCATGATTCACATTTCTATGTCACTAGTCACCGAGTAAAGGATTTCACTTTCCTAGGTCCAGTGTGCACAATTTATTCAGTTTAAGCTCTTGCTCTGATAATAGTGCTGTGATTCTTAACTGCACTTATTAACTTTCTGTATGACATAAATACCCCTTAAATGAAGGCAAAATATGCACTTTCCCTTAAATGTATCCTAAAAACACCTCATGACTGGTCCACCAATCTGAAATTACAACACATGTAAGAACTAGGTCACTGTGCCCTAAATTCCAATCCATTCATGGAAGTCTACACAATTGGGTATTCATGTTCTGTGCACAGCAGAGATGCTGATTCATGCTGATTCATAATGTGCAATTCTGTTCGCATTATGAATATGATAAATACAGGATTGGGTACAGCAGTGTATGGTGTTGGAGTATTTCTGGCATTTATGGAGAAGAGAAGgtcatattttgaataaatacatgagaaCCTTGAAAATGTGATTCAATATGTGTGTTCCATTCCATAAACGTCCATCATGGTTGTATGTTGTAATTCATAAAGAAGGGTACGTATTCCCTTCACACAGCTTTCCATCTCTGTCTCAATcttccaacaaaaataaaaacgcatTTCTTACTGATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003501 True 2140 mRNA 0.38 3 6620811 6646702

Neighbor

gene id symbol gene type direction distance location
AMCG00003499 NA coding upstream 244512 6375259 ~ 6376299 (+)
AMCG00003500 NA coding upstream 353304 6266901 ~ 6267507 (+)
AMCG00003496 NA coding upstream 705219 5914471 ~ 5915592 (+)
AMCG00003497 NA coding upstream 795079 5824581 ~ 5825732 (+)
AMCG00003498 NA coding upstream 850874 5767358 ~ 5769937 (+)
AMCG00003505 NA coding downstream 76828 6723530 ~ 6736370 (+)
AMCG00003506 NA coding downstream 171914 6818616 ~ 6825710 (+)
AMCG00003507 NA coding downstream 181227 6827929 ~ 6870265 (+)
AMCG00003513 NA coding downstream 393109 7039811 ~ 7040909 (+)
AMCG00003516 NA coding downstream 398514 7045216 ~ 7047403 (+)
G990 NA non-coding upstream 634417 5986038 ~ 5986394 (+)
G983 NA non-coding upstream 664991 5955604 ~ 5955820 (+)
G960 NA non-coding upstream 791066 5829459 ~ 5829745 (+)
G908 NA non-coding upstream 1062296 5557607 ~ 5558515 (+)
G907 kbtbd11 non-coding upstream 1064505 5550745 ~ 5556306 (+)
G1146 NA non-coding downstream 426702 7073404 ~ 7073609 (+)
G1187 NA non-coding downstream 718242 7364944 ~ 7365477 (+)
G1218 NA non-coding downstream 842743 7489445 ~ 7489881 (+)
G1241 NA non-coding downstream 877159 7523861 ~ 7750465 (+)
G1242 NA non-coding downstream 880157 7526859 ~ 7528458 (+)
G1012 NA other upstream 125906 6487692 ~ 6494905 (+)
AMCG00003480 NA other upstream 1286059 5303450 ~ 5334752 (+)
AMCG00003469 NA other upstream 2098411 4514031 ~ 4522400 (+)
AMCG00003473 NA other upstream 2165669 4452564 ~ 4455142 (+)
AMCG00003524 rps7,LOC107668222 other downstream 851338 7498040 ~ 7504015 (+)
AMCG00003534 id2,LOC106566577 other downstream 2002423 8649125 ~ 8652470 (+)
AMCG00003541 asap2,LOC106566627 other downstream 2253754 8900456 ~ 8941751 (+)
AMCG00003544 NA other downstream 2429188 9075890 ~ 9106765 (+)
AMCG00003551 NA other downstream 2609126 9255828 ~ 9263468 (+)

Expression


Co-expression Network