G273 (LOC107698895,LOC107555251,LOC107751082)


Basic Information

Item Value
gene id G273
gene name LOC107698895,LOC107555251,LOC107751082
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 1541322 ~ 1611176 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU401
ttttttttttttttttttttttttttttttatgattttgttaatgcatttattttgcagaaatgaCGTGTGAGGTCATTACAAAGATTGCATGACACTTTCATTTCATGAAACGTTTGAATCCAACAATTAAGTCAACTAGATGGTTGTCATGCAGTCTGTATGAACGCAGCCAAACGTCGTCCGCCAGCTGtcatctggtaaaaaaaaaagtggtccAAAAATATCAGTATATCCTGCATGGtgcaagcattttttaaattttagccCGATATAACTTTGACTGACCTTCAGTTATACTTTAGAAGCATTGCACAACTTAATAATAGCACAAAGTTCAAACATGTTCCAAAAAATGATGACAATGAACAGTCACTTAACTTAATGACATCTCATTAGGGTGCAAGGATAATTTTTAACGATAAGGAAAAGCTCACTGGGGTCTCACAATGTCGTGCATCCTGAGCTCCTGCAGGGTGTGCGGCTGGTATTCGGTGCCTTGTCTGAACTCATCCACTGAAACAAACAGGGGGACTCAGTATTTCACAGATAGTTCACACAAAGAATGAAAGTATTTCAAATGCTTGGATTCAAAGTCTTGTTAAAATAAGGCGGCATTATTGGCATTGATGGTTACATGAAGAACACCCATGGAatctttccattgcacaaaagatTATATAGAtttgagagcaaaaaaaaactcaaaatggcCCTTCATTGCTTTGAAAAACCCTTTTTGGAATCTTAATTGTGTAGTAAGAAATTATGAAAGAATTGATCATTTTTTGAGGAAAAATCTTATGAAGTGCAAAACTGATCCGCCTTGATTGCTCCAAGTGGGATTCAGAGAATTCTTTCCACAATCTCTTGTGTCATTCTTTGGCATGCCATGGTTGATATCATGTTTTGAAGCTCTCACATGGTGCAGCGCTCCTCTGCAGCTCTGTTAGAGATGGCATTATTTGTCCAGTTCTGGGATCCACGAGAGTGGCGTGAGAATTCTGGGTTCCCTTCTTCATCTCGTAAGATGGAGGATTGTAGactgtggagaaaaaaacactagttaaatatgacaaaaagtgcctgatgatattttaaaaatgcctcGCAGACATACAGCCAGAAACCCTTCTGTTCATTTCGCCAACTTCGTGCTTGAGCATCCCGGTGTCCATGTCCATCAGGAATCGCCTGGAAGGTTCTGTTCCCTGTCTCTTCTCAATAGGGCCTGGATTATAGACTGTGGAGAAAAATAACATGCTGTCAAAGGTACCCAGAATCTACTCTCTTTAATGTCATTGTTTATACTAGTGTTTGttcatgcaattttatttagcaaagcaGCACTAAAATCtataatgcaaattatttttcagACTTACAGCCAGAAACTCTTCTGTTCATTTCGCCGAGTTGCTCCTTGGGCATCCCAGTGTTTGTGTCGATCAGGATCCGTCTGGAAGGTTCTGTGCCCTGTCTGCGGATCTCAACAGGAACTGCTTTGTGGTTCTCCTTATGTCTAGAAGAGTcctttttattttggtgttctTTAAGTAGACTGGCGTTCGTATTCATCAGGAGGTTTCTGGAAGGTTCAGAGCCTTGTTTGTGCAGCGCACTCGATCTGAGCTCCTGTAGGATGTACGGCTGGTACTCAGTGCCTTGTCTGAACTCATCCACTATAGAGGAAAGAAACAGGGACAAACATAGTATTTGAAAGCATAGTcaaaaagttacatttcttCAGTGCTTTAAAGTCGATCTGGATAGTTGTTTTGTTAAACACTAACTAAACCATTTTGGAACATTTAAGATGTAAGTAATTATGAcgaaattgaatttttttgagGAATCGCAAGCGCAAGCAGTGTAGGTATTTTTAACAACTTTGAAAGTGTTTGAACATGTCATTTGATTGATATATCCAAAGTACTTACATGGAGCAGCGCTCCTCTGCAGCTCTGTTAGAGATGGCATTATTTGTCCTGTTCTGGGATCCACGAGAGTGGCGTGAGAATTCTGGGTTCCCTGTCTCTTCTCAATAGGGCCTGGATTGTAGActgtaaacaaaataacataCTATATTGCATGTTGACCTTACATATAATAGgtagatgttttaaaaaagggaaacaacactaatatatataatgcaaattatttttacagcCGGAAACTCTTCTGTTCATTTCGCCGAGTTGCTCCTTGGGCATCCCAGTGTTTGTGTCGATCAGGATCCGTCTGGAAGGTTCTGTGCCCTGTCTGCGGATCTCAACAGGAACTGCTTTGTGGTTCTCCTTAGGTTGAGAAGAGTCTTGGCTTCTTATGTCCTCATGCTCAGAAACCACTTCCCATTTAGCTGCTAATGGATGTGAAAGAAAACATGAGTCCTGGGTTGGCGAGAAAGCAAAAAGATCTTGTAGACCAATGAATAATCTCTATTAGAAAGTGAGACTTACAGCCGGCTGATCTCCTGTCCGTCTCGTCCCTGTGTTCTTTGAGCAGACCGGTGTTCAGGTCCATCAGGATATTCTGGGATGCGTCAGTGCCTTTTCTGTAGACCTCGTCAGGGATCGCTCTCTGCTCGTGTTTTTCGCTCTGAGCGCTGTACTGCGATCTCATCACGGGACGCATCCTGAGCTCCTGCAGGGTGTGCATCTGCTTCTCAGTGCCTTGCCTGAACTCATACATCCCGAAACTCTTCTGTTCATTTCACCAACTCCATGCTTGATCATCCCAGTGTTCAGATCCATCAGGAAGCGTCTGGAAGGTTCTGTTCCCTGCCTGCAGAACTCAGCGGGAACTGGTAATTGCTTCATGGGTTTCACATCAGTGTTCGTGAGCTTCAGAACTGAGTTATCCCTGTGTTCATCTTGGACCATTTGTGGCCCTATTTGTTTTAATCTACCATTTGGGAATCGGTGCAGTGGTCTTGCGTGGAGACCTGCAAACACATCACGAACATCAAACCTGAAGCTCGTTTCTTACACATTAAACAGGGCGAAAAGACTTTTATATAATCACAATTAACCTAATAGCACACCTCTACTTCACAAGCCATAAATACTGATTTACGACTTGCCTCTATCTCAGTTGCTGAACAAACATCAAATTTTTTATCAAGctgataaaatgtgtttatcaagCTGATAAAAAGAAGCAGCAGACGTGGTTCAGACCTTATAAAGGTTGAAGTTCAGAAGAACATTGTGAAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC107698895

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU401 True 3217 lncRNA 0.38 5 1541322 1611176

Neighbor

gene id symbol gene type direction distance location
LOC122348945 LOC107718016,LOC107555266,LOC107568777,LOC107709315,LOC106575573,LOC108429863,LOC105889574 coding upstream 76037 1456086 ~ 1465285 (+)
LOC122350806 NA coding upstream 194529 1334924 ~ 1346793 (+)
LOC122351641 NA coding upstream 209773 1328385 ~ 1331549 (+)
LOC122347468 LOC107653668,LOC107730391,LOC107746981,LOC107559791,LOC107677846,LOC107555244,LOC107730385 coding upstream 279354 1246693 ~ 1261968 (+)
LOC122347479 LOC107730391,LOC107653668,LOC107677846,LOC107555244,LOC107746981,LOC107559791 coding upstream 290988 1245163 ~ 1250334 (+)
zgc:152904 zgc:152904,ncam2,LOC107698913,LOC107751079,LOC107721821 coding downstream 100866 1712042 ~ 1893196 (+)
LOC122345473 LOC107751076,LOC107593744,LOC107698914,LOC100332351 coding downstream 326274 1937450 ~ 1941621 (+)
gart gart coding downstream 330885 1942061 ~ 1961643 (+)
LOC122350785 adamts5,LOC107751075,LOC107593743 coding downstream 542060 2153236 ~ 2171533 (+)
adamts1 adamts1,LOC107698918,LOC107751074,LOC107593742 coding downstream 567035 2178211 ~ 2184501 (+)
G270 NA non-coding upstream 55679 1485146 ~ 1485643 (+)
G227 NA non-coding upstream 73191 1467485 ~ 1468131 (+)
LOC122350990 NA non-coding upstream 138707 1357834 ~ 1402615 (+)
G203 atp1a1a.1,LOC107718011,LOC107698904,LOC107555257,LOC107653678,LOC107717912,LOC105923069 non-coding upstream 142348 1396899 ~ 1398974 (+)
G217 NA non-coding upstream 157292 1383753 ~ 1384030 (+)
G312 NA non-coding downstream 294476 1905652 ~ 1905963 (+)
G318 NA non-coding downstream 319481 1930657 ~ 1991767 (+)
G319 NA non-coding downstream 320640 1931816 ~ 1933144 (+)
G320 NA non-coding downstream 324997 1936173 ~ 1951320 (+)
G404 NA non-coding downstream 470296 2081472 ~ 2081820 (+)
LOC122327253 NA other upstream 99656 1439040 ~ 1441666 (+)
G136 kpnb3,ipo5,LOC107730386,LOC107677849,LOC107555240,LOC107653674 other upstream 420601 1119719 ~ 1120721 (+)
LOC122341994 NA other upstream 1091682 445940 ~ 449640 (+)
G10 NA other upstream 1363122 177716 ~ 178200 (+)
cyyr1 cyyr1,LOC107751099,LOC107698919,LOC107593871 other downstream 574645 2185821 ~ 2192464 (+)
grtp1a grtp1,grtp1a,LOC107571994 other downstream 872464 2483640 ~ 2489103 (+)
setdb2 LOC107570068 other downstream 882396 2493572 ~ 2558527 (+)
pcid2 pcid2 other downstream 900396 2511572 ~ 2518385 (+)
G474 f10,LOC107654567,LOC107694470,LOC107751061,LOC107747060 other downstream 913349 2524525 ~ 2527244 (+)

Expression


Co-expression Network