LOC122357974


Basic Information

Item Value
gene id LOC122357974
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056712.1
NCBI id CM032081.1
chromosome length 26701998
location 25890072 ~ 25897581 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043257682.1
AAAAGATGCTGAGCTTAAATATCACGGTATTAAACACAGAGCAGCAAGATAGCGCTGGGTCGAAAGAAACGGTATATTGCATTCAATTTAGTcaaagtttagattttttttgtgtgtgtgtgcatgctctGTATTCCGTGCATCGGTCTAGGGAAGATGTTTGAGCGTCATGGAACAGAGCTCGGAGTTACGAAACATGCCAGACCTTCACTTCTGACTTCCTAAAAGACTGAAGCAGAGCAGAAAGTCCCCGGCGGCGTCTGAGCGAGTCTCATGGCTCTGGACGCTCTGATCCGGCTCTTCAGCTTCATGTCAGtgtgtgtgtttgggacgAGTCCCGGCGTCTCTCTGTCCGTCCCGGAGCGAGTGCTGGCTCTGGAGGGCTCGTGTCTGGTCATCCCCTGCTCCTTCAGACCGGACCCTGGCTCTCCGGTGGAGGTCCGTCTGGTCCGGTCTTCCTCGCCGTTCTTCATGATGCTGCGGAGGCCGGTGTTCAGCTCGGAGCGCGGCGACGCTGTTCATCCCTCCTTCAGAGACAGAGCGGCGCTCGCCGGGAACGTCAGCGCCGGAGACTGCTCGGTCAGCTTCAGCAGCGTCCGCCGGGACGACCACAACACCTACGAGCTGCAGCTCAGGGAGAGAGGTCAAAGGTCGTGGCCCGCCGGCCGCAAGGTCAACGTCAGCGTCACCGGTTCCCCGGAGCCGCCCGAGCTGTCGGACCCGGGGCCCGTGACGGAGGGCCAGCGGCTGGTGTTGAACTGCTCCGCTCGGGTCAGCTGTCCGTCCGATCGGCCCCGTCTGAGCTGGAGCTGGAGCGGGAgcggtgacacacacacacacacacacacagagctgcagCCGGACGCCGGTCGGTCTCCACGGATACGCTCCAGTCTCAGCTTCACCGTCCGGCCCGGCCCTAACCCCAGAGTCCACTGTGAGCTCCAGTACCCTGACCACCGCAGATCCTCCACCTCCCGACAGATCCTCGtccagtTCGCTCCTCGAGACGTCGGGGTGCAGGTCCTGAGCTCTTCGGTGCGTCTCGGAGGAAACGCTCTGCTGCTGTGTTCCTGTAAAGCTGATCCTCCGGTGTCTGAGTATCAGTGGTGGAGTAACACACAGATCCTGAAGAAACGCTCTCAGAGCGTCCGGATCTTCAACATCAGCCGAGACACGCTGGTCCAGTGCAGCGCCGCTAACCGCCTCGGACAGAGCTCGTCTCCTAAAACCAGACTCAACGTcctgtacgcTCCGGTGATCGAGTCCCGCTCGTGGTGTGTGTGGGACGGGGTGCTGCTGTCCTGCCTCTGCGCCGTGGACTCGAACCCTCGGCCGGCCGTCACCTGGAGCGTGAACGGGACGCAGCCGCCGGACGGATTCAACACCTCCTCGTCCTACGAGAACGAGACGCTGACGGCGAGGCTCCGAGGGGTGTCTGAGGCCCCGGGGCCCGTCGAGTGTCACGCCGTCAGCGAACTCGGAAACCACTCGCTCCTGCTGCTCTCGCCGCGCCACGATGATCTGATGTGGACGGTGATCCCGAGCGCAGGGGCCGtgtctcttcttcttcttcttctgctgtgTCTGCTGCTGTGTTTCTGCCGCTGCAGGACGAGGCGGAGGAGTCGAGTCTCGAGCTGTGGACCTCCTCCAGGCGTCTATCAGGAGCGGATGCCGCTCTACATTAACTGCAGTGAAGTCACAAACGTCTACAGCAACGGCAGCTACCAGCTCATCTACCAGAACTGCACCCCGCTCTTCGTTCGCAGCAAACAGctgtaTAAGAGACAGAGACGAGGAGCGAGACGTCAGAGAGTGATCCCCGTCACGACAGACTCAGACACAGCCGTCTATGTGGAGGTCAtctgatgatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgagtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043257682.1 True 1949 mRNA 0.60 8 25890072 25897581

Neighbor

gene id symbol gene type direction distance location
LOC122357986 LOC107749198,LOC107684185,LOC107596683 coding upstream 48428 25837791 ~ 25841644 (+)
csnk1a1 csnk1a1,LOC106611977,LOC107593197,LOC107554841,LOC107742481,LOC106604944 coding upstream 780505 25092111 ~ 25109567 (+)
sil1 LOC107740135,LOC107680960,LOC107742487,LOC107680335,LOC107580120 coding upstream 803513 25083816 ~ 25086559 (+)
spdl1 spdl1,zgc:171223,LOC107742485,LOC107680346 coding upstream 806613 25074604 ~ 25083459 (+)
gsr gsr,LOC107740139,LOC107593200,LOC107742476,LOC107680343,LOC107554844,LOC107680979 coding upstream 821645 25060085 ~ 25068427 (+)
xrcc1 xrcc1,LOC107737754,LOC107677402,LOC107565304 coding downstream 1535 25899116 ~ 25917595 (+)
drd2l drd2l,LOC107673327,LOC107738867,LOC107565303,LOC108431000,LOC107724766 coding downstream 21685 25919266 ~ 25936250 (+)
LOC122357978 LOC107565302 coding downstream 39053 25936634 ~ 25944086 (+)
LOC122357996 NA coding downstream 47021 25944602 ~ 25948014 (+)
ethe1 ethe1 coding downstream 50635 25948216 ~ 25954700 (+)
LOC122357999 NA non-coding upstream 57827 25830215 ~ 25832245 (+)
G102284 gpc2,LOC107716510,LOC107665619,LOC107573391 non-coding upstream 89881 25799205 ~ 25800191 (+)
G102212 NA non-coding upstream 132579 25757175 ~ 25757493 (+)
G102209 NA non-coding upstream 137936 25751779 ~ 25752136 (+)
LOC122357405 NA non-coding upstream 169144 25717393 ~ 25720928 (+)
G102334 wdtc1,LOC107570846,LOC107673335 non-coding downstream 140995 26038576 ~ 26040075 (+)
G102335 NA non-coding downstream 149469 26047050 ~ 26056104 (+)
G102341 NA non-coding downstream 160582 26058163 ~ 26058439 (+)
G102344 NA non-coding downstream 187799 26085380 ~ 26090260 (+)
G102348 NA non-coding downstream 196264 26093845 ~ 26126060 (+)
LOC122358267 LOC107593202,LOC107740141,LOC107680337,LOC107554835,LOC108268827,LOC105904295 other upstream 830872 25057752 ~ 25059200 (+)
G102017 LOC107680957,LOC107593209,LOC107740154,LOC100534741 other upstream 1673309 24216243 ~ 24216763 (+)
tmem35 tmem35a,tmem35,LOC107680989,LOC107740187,LOC107724834,LOC107688707 other upstream 1800550 24086724 ~ 24089522 (+)
nitr14b NA other upstream 1917823 23970152 ~ 23972249 (+)
neil3 neil3 other upstream 3301539 22584190 ~ 22588533 (+)
G102332 wdtc1,LOC107738793,LOC107673335 other downstream 135398 26032979 ~ 26035638 (+)
gnrhr3 LOC107567517,LOC107673322,LOC108436550,LOC105908885 other downstream 270977 26168558 ~ 26175734 (+)
khdc4 kiaa0907,LOC107570803,LOC107565361,LOC107679549 other downstream 476752 26374333 ~ 26383784 (+)
LOC122357543 vps13b,LOC107570792,LOC107671824 other downstream 503946 26401527 ~ 26429629 (+)

Expression


Co-expression Network