G169562


Basic Information

Item Value
gene id G169562
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035915.1
NCBI id CM008318.1
chromosome length 35429340
location 22878348 ~ 22879682 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU229622
agagagagagagagagagagagagagagtacagtagatcatgctgctgtttctccatcagcagccggagtctgagagagagagagagagagtacagtaggtcatgctgtttctccatcagcagccggagtctgagagagagagagagagagagagagagagtacagtagatcatactgcttctccatcagcagccggagtctgagagagagagaagagagagaggagagagagagtacagtagttcatgctgtttctccatcagcagccggagtctgagagagagagagaacaagagagagagagagagtacagtaggtcatgctgttttccatcagcagccggagtctgagagagagagagagagagagagagagtacagtagatcatgctgtttctccatcagcagccagagtctgagagagagagagagagagagagagagagagagagagagagagaacagtaggtcatgctgtttctccatcagcagccggagtctgagagagagagagagagagagagagagagagagtacagtaggtcatgctgtttctccatcagcagccggagtctgagagagagagagaagagagagagagagaagagagagagagaacagtaggtcatgctgtttctccatcagcagccggagtctgagagagagagagagagagagagagagagtacagtagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU229622 True 695 lncRNA 0.50 2 22878348 22879682

Neighbor

gene id symbol gene type direction distance location
LOC103024581 NA coding downstream 318966 22512903 ~ 22559382 (-)
fam46c fam46c,LOC107658236,LOC107597368,LOC107724489,LOC107668849,LOC107569365 coding downstream 558327 22315797 ~ 22320021 (-)
wdr3 wdr3,LOC107712260,LOC107658238,LOC107569352,LOC107724477 coding downstream 646344 22207557 ~ 22232004 (-)
hao2 hao2 coding downstream 992674 21870790 ~ 21885674 (-)
LOC103032289 LOC108431447,LOC108266533,LOC107724495,LOC107668845,LOC107569301,LOC107597372 coding downstream 1007943 21861005 ~ 21870405 (-)
LOC103024947 LOC108266290,LOC108435066,LOC107714355,LOC107601612,LOC107657493 coding upstream 215548 23095230 ~ 23566845 (-)
LOC111194931 ttnb,LOC108435066,LOC107714355,LOC107601612,LOC107716993 coding upstream 361658 23241340 ~ 23300036 (-)
LOC103024627 ttn,LOC108435065,LOC107657509,LOC107714399 coding upstream 434034 23313716 ~ 23465516 (-)
arhgap15 arhgap15 coding upstream 1231051 24110733 ~ 24198957 (-)
LOC111188175 NA coding upstream 2597245 25476927 ~ 25489657 (-)
G169565 NA non-coding downstream 1406 22875567 ~ 22876942 (-)
G169544 col5a2,LOC108435067,LOC108266478 non-coding downstream 25001 22850767 ~ 22853347 (-)
G169542 NA non-coding downstream 38941 22838585 ~ 22839407 (-)
G169537 NA non-coding downstream 65566 22812466 ~ 22812782 (-)
G169522 NA non-coding downstream 83360 22743748 ~ 22794988 (-)
G169571 NA non-coding upstream 30910 22910592 ~ 22910793 (-)
G169582 NA non-coding upstream 50851 22930533 ~ 22930857 (-)
G169588 NA non-coding upstream 59880 22939562 ~ 22960371 (-)
G169606 NA non-coding upstream 97076 22976758 ~ 22977161 (-)
G169613 NA non-coding upstream 130857 23010539 ~ 23011623 (-)
man1a2 man1a2,LOC107668846,LOC107658234,LOC107724469 other downstream 402076 22338439 ~ 22476272 (-)
G169286 NA other downstream 1055310 21822713 ~ 21823038 (-)
cryl1 cryl1,LOC107712274,LOC107668879 other downstream 1212225 21648617 ~ 21666123 (-)
G169171 mphosph8 other downstream 1304938 21565128 ~ 21573410 (-)
LOC103045992 arhgef7a,LOC103045992,LOC108431465,LOC108266998,LOC107712280,LOC107597388,LOC103372297,LOC105913244,LOC107668898 other downstream 1376559 21474662 ~ 21501789 (-)
G169567 NA other upstream 15086 22894768 ~ 22895432 (-)
G169980 arglu1a,arglu1,LOC107555859,LOC108438027,LOC107673121,LOC107675355 other upstream 1427968 24307650 ~ 24352908 (-)
LOC111194864 NA other upstream 2622258 25501940 ~ 25509416 (-)
LOC103030841 uggt2,LOC108430493,LOC108266228,LOC107600415,LOC107663813,LOC107555197 other upstream 2918828 25798510 ~ 25905616 (-)
LOC103029246 LOC108430494,LOC108266255,LOC107551943,LOC107663912,LOC107733654,LOC107738526 other upstream 3346775 26226457 ~ 26252266 (-)

Expression


Co-expression Network