G169286


Basic Information

Item Value
gene id G169286
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035915.1
NCBI id CM008318.1
chromosome length 35429340
location 21822713 ~ 21823038 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU229253
ttagactggacaggggacacagatTGGACAAAAGAATGGGCAGGGAGCTTAGACTGGACAAAGGGCTGAGCCTGGACAGAGGATTGGACGctagactggacagagggctggacactagacagggacagagactggacagggggttgaaacacagactggacagtgGCCGGGAACTGGGACTGGACATGGGGCTGAACACTAGACAAAAACGCAGATGGGGTAGTGGACGGGAACAAGGACTGGacaagactggacaggggaactgGGACAAAAACATTGACAGGGATGGACACGAACACAGTGAAATGAACAGGAACTAATACAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU229253 True 326 TUCP 0.53 1 21822713 21823038

Neighbor

gene id symbol gene type direction distance location
LOC103027332 LOC103027332,LOC108270784,LOC107712254,LOC107658208,LOC107597416,LOC108431426 coding downstream 6485 21810980 ~ 21816228 (-)
ska3 NA coding downstream 16732 21797003 ~ 21805981 (-)
LOC103025519 LOC108431431 coding downstream 30239 21786966 ~ 21792474 (-)
lats2 lats2,LOC107569193,LOC107724484,LOC107712271,LOC107658249,LOC107668891 coding downstream 41088 21756360 ~ 21781625 (-)
xpo4 xpo4,LOC107724474,LOC107597380,LOC107712270,LOC107658250,LOC107668883,LOC107569111 coding downstream 73701 21696744 ~ 21749012 (-)
pla1a pla1a coding upstream 16972 21840010 ~ 21854005 (-)
hsd3b1 LOC108431428 coding upstream 31229 21854267 ~ 21859605 (-)
LOC103032289 LOC108431447,LOC108266533,LOC107724495,LOC107668845,LOC107569301,LOC107597372 coding upstream 37967 21861005 ~ 21870405 (-)
hao2 hao2 coding upstream 47752 21870790 ~ 21885674 (-)
wdr3 wdr3,LOC107712260,LOC107658238,LOC107569352,LOC107724477 coding upstream 384519 22207557 ~ 22232004 (-)
G169272 sap18,LOC107597378,LOC107668906,LOC107569214 non-coding downstream 26885 21792697 ~ 21795828 (-)
G169240 NA non-coding downstream 137382 21685079 ~ 21685331 (-)
G169239 il17d non-coding downstream 138109 21683939 ~ 21684604 (-)
G169219 zmym2 non-coding downstream 200965 21619653 ~ 21621748 (-)
G169216 mphosph8,LOC107658258 non-coding downstream 238062 21584092 ~ 21584651 (-)
G169315 NA non-coding upstream 4410 21827448 ~ 21831579 (-)
G169316 NA non-coding upstream 8991 21832029 ~ 21832622 (-)
G169324 NA non-coding upstream 54718 21877756 ~ 21879570 (-)
G169325 NA non-coding upstream 87288 21910326 ~ 21910539 (-)
G169338 NA non-coding upstream 139235 21962273 ~ 21964618 (-)
cryl1 cryl1,LOC107712274,LOC107668879 other downstream 156590 21648617 ~ 21666123 (-)
G169171 mphosph8 other downstream 249303 21565128 ~ 21573410 (-)
LOC103045992 arhgef7a,LOC103045992,LOC108431465,LOC108266998,LOC107712280,LOC107597388,LOC103372297,LOC105913244,LOC107668898 other downstream 320924 21474662 ~ 21501789 (-)
LOC103045487 sox1a,LOC108431466,LOC107569013,LOC107668909,LOC107658211,LOC107597426 other downstream 459464 21351331 ~ 21363249 (-)
LOC103042106 cb064,LOC103042106,LOC108431472,LOC107099897,LOC103140352,LOC101168000,LOC107389789 other downstream 644556 21174714 ~ 21178157 (-)
man1a2 man1a2,LOC107668846,LOC107658234,LOC107724469 other upstream 515401 22338439 ~ 22476272 (-)
G169567 NA other upstream 1071730 22894768 ~ 22895432 (-)
G169980 arglu1a,arglu1,LOC107555859,LOC108438027,LOC107673121,LOC107675355 other upstream 2484612 24307650 ~ 24352908 (-)
LOC111194864 NA other upstream 3678902 25501940 ~ 25509416 (-)
LOC103030841 uggt2,LOC108430493,LOC108266228,LOC107600415,LOC107663813,LOC107555197 other upstream 3975472 25798510 ~ 25905616 (-)

Expression


Co-expression Network