RNA id: XM_043265107.1


Basic Information

Item Value
RNA id XM_043265107.1
length 2071
RNA type mRNA
GC content 0.44
exon number 3
gene id arpp19a
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 9744904 ~ 9749783 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTTCGCCATAGTAGGATTAATGCATTCGTGGGCGGGCTGTACTAGAATAGTCTGCAGAACAGTATTTTAGATTGTGGACTAATTAATCAACACAGACTCGTTATATTAGAAAAAATGGAGGACATAAAGCCCGAGGAGACGAACGTGGACGAGCAGAAGgATGAGGAGAATAAGGTCTGTCCAGAGAAAATGGAGGAAGCCAAACTGAAGGCCAAATACCCTCACCTGGGTAATAAACCCGGAGGATCCGATCTGCTCAGAAAAAGACTGCAGAAGGGGCCAAAGTACTTCGACTCGGGCGACTACAACATGGCGAAGGCCAAGATCAAGAACAAGCAGCTTCCAGCAGCGCAGACAGAGAAGACCGAAATCACCGGAGACCACATCCCCACTCCTCAGGACCTGCCGCAGAGGAAACCCTCTCTGGTGGCCAGCAAACTGGCCGGCTGATACCTGCTGCCGTTCTTCACTCCACGCTCCCACTTCCTGTCTCTCCTCCATTTATCTCTGATCCTGCATTCCTGCCCTCATCCTCTTATCGTTTCCTGTCCTCTGAAAATACACTGAATATTCAAGGGTTGCAGATGTTACAGAGCTGTACTGCCGCACTGTGAGATGGGTTCGGGTTCGGGTCGTGGCTCCAAAGGGGGGGGTGAAGTTCTCAAAGGTCTTctgatatttttaatgtgtcGTAGTATGTAGTtgaaagtgtacatatttgctAGCGAGTGAGGGCAAACAGCGTTTTAGgagatgtttttgcatttttattgtaaccATTCCTGAATTACCCACTGCTTAGAGGACGAGGTCACCCAaagatgaaaattctgtcatttactcattgcgtatgactttatttcctCCGGTGAACGCAAAAAGAGAAGTTCAGTGGAATGTCAACTGATGTttcgaaaataaataaagaaaagtctATAAAGGGAAAGGGAAGTAGAGCTAAAACAACTGCATTGTAATTAGTCTGCACAGCTTCTATCTATGTTTAGAACAACCGTTGAGGTCCACGAGATGCAGACCTTTTTGTGGTGTATTATAATAGTTGTACTTTGGTGCGAAGATGTTGTACAATGCCAAGATAACAGACTTTCTTATCCGAGCTGAATAGCCCTCATCGGTGTCAAAATGATTTAGACGGCCAATGAAATCAGAGTACGCATCGCCGAAACTGTTTCCGGTTTACACACTCAAAGCTGAATGTGAATTAAAAGCATTATTCAGTTTGCGTCACTAGTTCCAACGCTTGATGTTTGACAGCCGTGTGTCTGgtgtcttctgaagccatattgtaactttgtgtttttgtgtcgtTAGCGCTTGCATTCaattcaaatcatttaaatgacacATTAAATTCAATCGCGCAGCCAGTCGTATTTTGACGCCGGTGCAGATGcattaaatgtaagttttaaaattaaatgatgatttttaGCAAATTACAACTTGGCTTCAGAAGACTGAGATCCAAAGAAAGTCAAGTGCGGCTGGAATGACGCGAGTGAAGAGTAAATTGTCCCAGAATTTTCTTTTCGGGGTGAGCTTTTCCATTAATCATGGAGTTAAGTGCTTGAATCGATAATGAATTGAAAGTAATCTATAATAATGTGGTTGATCTGCACCCGGTTTCTTTTTGTCATGTTTCGGCTGTAAGTGGAGGACACTTGGTTAGTCGTGTCTGATAGCATGAAATGCAGATCTCTGAGGCTGCTGTCATCTTGCCTTGTACCATAGAGCTTAAAGCCTTATAAAGATGTAGTGCCAATGCACAGATTGGCAAGCAGTTCTATAATATCACACGTTTCTTTCATACGTCGTGCATCTGGTTGTAGACTCCAGGCAAGTGAGGACGCTTCTCCACCTTCTGGTGTGTAATAAACTCCATGAGATCTCCTGTACATTGTCTTCTATGCAGAGGAGAGAGACGGTTGCCTGTCGGCTCCTCACACCACATCGTCGCACTACAGTAAACTGTCCACGGTTTGCATGAGCATAAGCTGTGGCCGCTTTTGAGCCATTTTGacttgtaaataaaatagttttgcaaACCTTC

Function

GO:

id name namespace
GO:0045722 positive regulation of gluconeogenesis biological_process
GO:0005102 signaling receptor binding molecular_function
GO:0015459 potassium channel regulator activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU184883 lncRNA upstream 49221 9694203 ~ 9695683 (+) True G125236
TU184824 lncRNA upstream 232662 9419549 ~ 9512242 (+) False G125194
TU184828 lncRNA upstream 232662 9419549 ~ 9512242 (+) False G125194
TU184830 lncRNA upstream 232662 9419549 ~ 9512242 (+) True G125194
TU184803 lncRNA upstream 393006 9351635 ~ 9351898 (+) True G125191
TU184908 lncRNA downstream 36477 9786260 ~ 9788103 (+) False G125243
TU184910 lncRNA downstream 36477 9786260 ~ 9788103 (+) False G125243
TU184906 lncRNA downstream 37054 9786837 ~ 9787955 (+) False G125243
TU184907 lncRNA downstream 37054 9786837 ~ 9787955 (+) True G125243
TU184887 lncRNA downstream 53136 9802919 ~ 10037928 (+) True G125240
XM_043264262.1 mRNA upstream 5498 9709204 ~ 9739406 (+) True fam214a
XM_043264263.1 mRNA upstream 5498 9729301 ~ 9739406 (+) False fam214a
XM_043263914.1 mRNA upstream 42758 9696223 ~ 9702146 (+) True onecut1
XM_043263915.1 mRNA upstream 42758 9696223 ~ 9702146 (+) False onecut1
XM_043216606.1 mRNA upstream 180657 9555052 ~ 9564247 (+) True iqcg
XM_043264877.1 mRNA downstream 1474 9751257 ~ 9801571 (+) True LOC122363015
XM_043264075.1 mRNA downstream 398292 10148075 ~ 10160926 (+) True LOC122362557
XM_043264076.1 mRNA downstream 409493 10159276 ~ 10160926 (+) False LOC122362557
XM_043264134.1 mRNA downstream 440987 10190770 ~ 10193160 (+) True LOC122362596
XM_043264594.1 mRNA downstream 447021 10196804 ~ 10209150 (+) True gnb5b
TU184804 other upstream 379416 9359436 ~ 9365488 (+) True G125192
TU184604 other upstream 1207956 8176353 ~ 8536948 (+) True G125041
TU184436 other upstream 2566628 7177839 ~ 7178276 (+) True G124920
TU184430 other upstream 2571884 7172626 ~ 7173020 (+) True G124914
TU184395 other upstream 2717769 7026318 ~ 7027135 (+) True G124881
TU185257 other downstream 1075191 10824974 ~ 10837276 (+) False G125461
TU185261 other downstream 1075191 10824974 ~ 10837276 (+) True G125461
TU185314 other downstream 1218302 10968085 ~ 10969767 (+) True G125496
XR_006253172.1 other downstream 1476332 11226115 ~ 11231714 (+) False ccnl1a
XR_006246968.1 other downstream 1484548 11234331 ~ 11237147 (+) False selenot1b

Expression Profile