RNA id: TU209141



Basic Information


Item Value
RNA id TU209141
length 331
lncRNA type inter_gene
GC content 0.56
exon number 2
gene id G141662
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 24692002 ~ 24692486 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCAGACCCAACAACGAAAGAGCACGcgaaaataaactaaaacggTTCTGTGGCAGCAAATCAATTGCAACTTTGTGCGATGCATCAGTTGTCATCTGCCCCCACGAATCAAAGTCCGTGCCCTTTTTAAAACTCGCGTGCCATTTCTGGACGGTTTTGCCGACGTCTGACATCTTCTCGGGTTGAAGTCGCGCGAAAGCTCAGGGCTCTGACATCGCTGAAGTTTTACCTCCAGCGCCGCATCGTTGCGCACCGCCGGGGAAACGCGCTGGGCTCCGGACGCTCCGGTGGCATCGCCGCACACCGACACAGGCCTGACGCGACTGCAACCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU209133 lncRNA downstream 75355 24611866 ~ 24616647 (-) True LOC122325459
XR_006247301.1 lncRNA downstream 75592 24614271 ~ 24616410 (-) False LOC122325459
TU209088 lncRNA downstream 146453 24545016 ~ 24545549 (-) True G141624
TU209086 lncRNA downstream 168171 24522383 ~ 24523831 (-) True G141622
TU209098 lncRNA downstream 169791 24521977 ~ 24522211 (-) True G141634
TU209121 lncRNA upstream 32456 24724942 ~ 24726684 (-) True G141648
TU209124 lncRNA upstream 34575 24727061 ~ 24727733 (-) True G141650
TU209158 lncRNA upstream 84129 24776615 ~ 24776863 (-) True G141676
TU209170 lncRNA upstream 96186 24788672 ~ 24788904 (-) True G141679
TU209173 lncRNA upstream 102369 24794855 ~ 24798633 (-) True G141682
XM_043219695.1 mRNA downstream 913 24682627 ~ 24691089 (-) True brox
XM_043219697.1 mRNA downstream 1837 24682627 ~ 24690165 (-) False brox
XM_043219698.1 mRNA downstream 9528 24678486 ~ 24682474 (-) True LOC122324924
XM_043219699.1 mRNA downstream 14378 24674210 ~ 24677624 (-) True LOC122324925
XM_043220506.1 mRNA downstream 18940 24620458 ~ 24673062 (-) False disp1
XM_043220220.1 mRNA upstream 6686 24699172 ~ 24721106 (-) True mia3
XM_043218598.1 mRNA upstream 137363 24829849 ~ 24832990 (-) True hlx1
XM_043220390.1 mRNA upstream 146166 24838652 ~ 24851779 (-) True rhpn1
XM_043220235.1 mRNA upstream 159983 24852469 ~ 24861840 (-) True naprt
XM_043220236.1 mRNA upstream 172973 24865459 ~ 24867178 (-) True c20h8orf82
TU209125 other downstream 44581 24571413 ~ 24647421 (-) True G141651
TU209099 other downstream 161127 24525882 ~ 24530875 (-) False slc35b2
TU209065 other downstream 430966 24257786 ~ 24261036 (-) False LOC122324315
TU208856 other downstream 685337 24004687 ~ 24006665 (-) True G141502
XR_006247216.1 other downstream 868952 23792077 ~ 23823050 (-) False tbc1d32
TU209178 other upstream 155179 24847665 ~ 24851761 (-) False rhpn1
TU209665 other upstream 636094 25328580 ~ 25329605 (-) False wasf1
TU209701 other upstream 638440 25330926 ~ 25377416 (-) False wasf1
TU209689 other upstream 700634 25393120 ~ 25407942 (-) False mettl24
TU209680 other upstream 703722 25396208 ~ 25407942 (-) False mettl24

Expression Profile